eF-site ID 5vyp-Q
PDB Code 5vyp
Chain Q

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence Q:  AKDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain Q
residue 36
type
sequence K
description binding site for residue PIO L 101
source : AD8

2) chain Q
residue 1
type
sequence K
description binding site for residue PIO P 101
source : AE5

3) chain Q
residue 36
type
sequence K
description binding site for residue PIO P 101
source : AE5

4) chain Q
residue 1
type
sequence K
description binding site for residue PIO Q 101
source : AE6

5) chain Q
residue 4
type
sequence K
description binding site for residue PIO Q 101
source : AE6

6) chain Q
residue 33
type
sequence H
description binding site for residue PIO Q 101
source : AE6

7) chain Q
residue 35
type
sequence S
description binding site for residue PIO Q 101
source : AE6

8) chain Q
residue 36
type
sequence K
description binding site for residue PIO Q 101
source : AE6

9) chain Q
residue 37
type
sequence I
description binding site for residue PIO Q 101
source : AE6

10) chain Q
residue 38
type
sequence L
description binding site for residue PIO Q 101
source : AE6

11) chain Q
residue 40
type
sequence R
description binding site for residue PIO Q 101
source : AE6

12) chain Q
residue 37
type
sequence I
description binding site for residue PIO R 101
source : AE7

13) chain Q
residue 40
type
sequence R
description binding site for residue PIO R 101
source : AE7

14) chain Q
residue 1
type
sequence K
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

15) chain Q
residue 4
type
sequence K
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

16) chain Q
residue 13
type
sequence I
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

17) chain Q
residue 15
type
sequence I
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

18) chain Q
residue 33
type
sequence H
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

19) chain Q
residue 35
type
sequence S
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

20) chain Q
residue 36
type
sequence K
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

21) chain Q
residue 37
type
sequence I
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

22) chain Q
residue 38
type
sequence L
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

23) chain Q
residue 39
type
sequence R
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

24) chain Q
residue 40
type
sequence R
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

25) chain Q
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

26) chain Q
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

27) chain Q
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

28) chain Q
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

29) chain Q
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

30) chain Q
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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