eF-site ID 5vyp-P
PDB Code 5vyp
Chain P

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence P:  AKDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain P
residue 37
type
sequence I
description binding site for residue PIO O 101
source : AE4

2) chain P
residue 40
type
sequence R
description binding site for residue PIO O 101
source : AE4

3) chain P
residue 1
type
sequence K
description binding site for residue PIO P 101
source : AE5

4) chain P
residue 4
type
sequence K
description binding site for residue PIO P 101
source : AE5

5) chain P
residue 33
type
sequence H
description binding site for residue PIO P 101
source : AE5

6) chain P
residue 35
type
sequence S
description binding site for residue PIO P 101
source : AE5

7) chain P
residue 36
type
sequence K
description binding site for residue PIO P 101
source : AE5

8) chain P
residue 37
type
sequence I
description binding site for residue PIO P 101
source : AE5

9) chain P
residue 38
type
sequence L
description binding site for residue PIO P 101
source : AE5

10) chain P
residue 40
type
sequence R
description binding site for residue PIO P 101
source : AE5

11) chain P
residue 42
type
sequence L
description binding site for residue PIO P 101
source : AE5

12) chain P
residue 1
type
sequence K
description binding site for residue PIO Q 101
source : AE6

13) chain P
residue 36
type
sequence K
description binding site for residue PIO Q 101
source : AE6

14) chain P
residue 22
type
sequence K
description binding site for residue SO4 U 103
source : AF6

15) chain P
residue 1
type
sequence K
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

16) chain P
residue 36
type
sequence K
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

17) chain P
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

18) chain P
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

19) chain P
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

20) chain P
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

21) chain P
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

22) chain P
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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