eF-site ID 5vyp-N
PDB Code 5vyp
Chain N

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence N:  KDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILRR
CLCTKPC
Description


Functional site

1) chain N
residue 40
type
sequence R
description binding site for residue PIO M 101
source : AD9

2) chain N
residue 28
type
sequence K
description binding site for residue GOL M 102
source : AE1

3) chain N
residue 1
type
sequence K
description binding site for residue PIO N 101
source : AE3

4) chain N
residue 4
type
sequence K
description binding site for residue PIO N 101
source : AE3

5) chain N
residue 33
type
sequence H
description binding site for residue PIO N 101
source : AE3

6) chain N
residue 35
type
sequence S
description binding site for residue PIO N 101
source : AE3

7) chain N
residue 36
type
sequence K
description binding site for residue PIO N 101
source : AE3

8) chain N
residue 37
type
sequence I
description binding site for residue PIO N 101
source : AE3

9) chain N
residue 38
type
sequence L
description binding site for residue PIO N 101
source : AE3

10) chain N
residue 40
type
sequence R
description binding site for residue PIO N 101
source : AE3

11) chain N
residue 1
type
sequence K
description binding site for residue PIO O 101
source : AE4

12) chain N
residue 36
type
sequence K
description binding site for residue PIO O 101
source : AE4

13) chain N
residue 36
type
sequence K
description binding site for residue PIO P 101
source : AE5

14) chain N
residue 37
type
sequence I
description binding site for residue PIO P 101
source : AE5

15) chain N
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

16) chain N
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

17) chain N
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

18) chain N
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

19) chain N
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

20) chain N
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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