eF-site ID 5vyp-L
PDB Code 5vyp
Chain L

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence L:  DCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILRRC
LCTKP
Description


Functional site

1) chain L
residue 4
type
sequence K
description binding site for residue PIO L 101
source : AD8

2) chain L
residue 33
type
sequence H
description binding site for residue PIO L 101
source : AD8

3) chain L
residue 37
type
sequence I
description binding site for residue PIO L 101
source : AD8

4) chain L
residue 38
type
sequence L
description binding site for residue PIO L 101
source : AD8

5) chain L
residue 40
type
sequence R
description binding site for residue PIO L 101
source : AD8

6) chain L
residue 37
type
sequence I
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

7) chain L
residue 40
type
sequence R
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

8) chain L
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

9) chain L
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

10) chain L
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

11) chain L
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

12) chain L
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

13) chain L
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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