eF-site ID 5vyp-J
PDB Code 5vyp
Chain J

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence J:  AKDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain J
residue 37
type
sequence I
description binding site for residue PIO I 101
source : AD5

2) chain J
residue 40
type
sequence R
description binding site for residue PIO I 101
source : AD5

3) chain J
residue 4
type
sequence K
description binding site for residue PIO J 101
source : AD7

4) chain J
residue 33
type
sequence H
description binding site for residue PIO J 101
source : AD7

5) chain J
residue 35
type
sequence S
description binding site for residue PIO J 101
source : AD7

6) chain J
residue 36
type
sequence K
description binding site for residue PIO J 101
source : AD7

7) chain J
residue 37
type
sequence I
description binding site for residue PIO J 101
source : AD7

8) chain J
residue 38
type
sequence L
description binding site for residue PIO J 101
source : AD7

9) chain J
residue 40
type
sequence R
description binding site for residue PIO J 101
source : AD7

10) chain J
residue 42
type
sequence L
description binding site for residue PIO J 101
source : AD7

11) chain J
residue 37
type
sequence I
description binding site for residue PIO M 101
source : AD9

12) chain J
residue 36
type
sequence K
description binding site for residues PIO K 101 and GOL Q 102
source : AG4

13) chain J
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

14) chain J
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

15) chain J
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

16) chain J
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

17) chain J
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

18) chain J
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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