eF-site ID 5vyp-E
PDB Code 5vyp
Chain E

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence E:  AKDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain E
residue 36
type
sequence K
description binding site for residue PIO C 101
source : AC5

2) chain E
residue 1
type
sequence K
description binding site for residue PIO D 101
source : AC7

3) chain E
residue 36
type
sequence K
description binding site for residue PIO D 101
source : AC7

4) chain E
residue 1
type
sequence K
description binding site for residue PIO E 101
source : AC9

5) chain E
residue 4
type
sequence K
description binding site for residue PIO E 101
source : AC9

6) chain E
residue 33
type
sequence H
description binding site for residue PIO E 101
source : AC9

7) chain E
residue 35
type
sequence S
description binding site for residue PIO E 101
source : AC9

8) chain E
residue 36
type
sequence K
description binding site for residue PIO E 101
source : AC9

9) chain E
residue 37
type
sequence I
description binding site for residue PIO E 101
source : AC9

10) chain E
residue 38
type
sequence L
description binding site for residue PIO E 101
source : AC9

11) chain E
residue 40
type
sequence R
description binding site for residue PIO E 101
source : AC9

12) chain E
residue 40
type
sequence R
description binding site for residue PIO F 101
source : AD1

13) chain E
residue 13
type
sequence I
description binding site for residue GOL W 103
source : AG2

14) chain E
residue 36
type
sequence K
description binding site for residue PIO X 101
source : AG3

15) chain E
residue 37
type
sequence I
description binding site for residue PIO X 101
source : AG3

16) chain E
residue 13
type
sequence I
description binding site for residues PIO W 101 and GOL W 102
source : AG5

17) chain E
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

18) chain E
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

19) chain E
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

20) chain E
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

21) chain E
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

22) chain E
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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