eF-site ID 5vyp-B
PDB Code 5vyp
Chain B

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Title Crystal structure of the Plant Defensin NsD7 bound to PIP2
Classification ANTIMICROBIAL PROTEIN
Compound Defensin NsD7
Source (DEF_NICSU)
Sequence B:  AKDCKRESNTFPGICITKPPCRKACIREKFTDGHCSKILR
RCLCTKPC
Description


Functional site

1) chain B
residue 40
type
sequence R
description binding site for residue PIO A 101
source : AC1

2) chain B
residue 1
type
sequence K
description binding site for residue PIO B 101
source : AC4

3) chain B
residue 4
type
sequence K
description binding site for residue PIO B 101
source : AC4

4) chain B
residue 33
type
sequence H
description binding site for residue PIO B 101
source : AC4

5) chain B
residue 35
type
sequence S
description binding site for residue PIO B 101
source : AC4

6) chain B
residue 36
type
sequence K
description binding site for residue PIO B 101
source : AC4

7) chain B
residue 37
type
sequence I
description binding site for residue PIO B 101
source : AC4

8) chain B
residue 38
type
sequence L
description binding site for residue PIO B 101
source : AC4

9) chain B
residue 40
type
sequence R
description binding site for residue PIO B 101
source : AC4

10) chain B
residue 1
type
sequence K
description binding site for residue PIO C 101
source : AC5

11) chain B
residue 36
type
sequence K
description binding site for residue PIO C 101
source : AC5

12) chain B
residue 22
type
sequence K
description binding site for residue SO4 U 104
source : AF7

13) chain B
residue 26
type
sequence R
description binding site for residue SO4 U 104
source : AF7

14) chain B
residue 4
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

15) chain B
residue 33
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

16) chain B
residue 36
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

17) chain B
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI1

18) chain B
residue 15
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2

19) chain B
residue 37
type SITE
sequence I
description Required for formation of double helix => ECO:0000269|PubMed:27647905
source Swiss-Prot : SWS_FT_FI2


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