eF-site ID 5vvr-M
PDB Code 5vvr
Chain M

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Title Ternary complex of RNA Pol II, transcription scaffold and Rad26
Classification TRANSCRIPTION/RNA/DNA
Compound DNA-directed RNA polymerase II subunit RPB1
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c);
Sequence M:  LRFRGQPGEAKDDGDELYYQERLKKWVKQRSCGSQRSSDL
PEWRRPHPNIPDAKLNSQFKIPGEIYSLLFNYQKTCVQWL
YELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGP
VLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQ
HILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEI
SLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLG
TLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLI
SPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFL
HSSDLNQIQNGKRNVLFGIDILRKICNHPDGDPKRSGKMQ
VVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDL
SHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLLTTRVGG
LGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVS
IYRLMVGGSIEEKIYHRQIFKQF
Description


Functional site

1) chain M
residue 322
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00541
source Swiss-Prot : SWS_FT_FI1


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