eF-site ID 5vsm-B PDB Code 5vsm Chain B click to enlarge Title Crystal structure of viperin with bound [4Fe-4S] cluster, 5'-deoxyadenosine, and L-methionine Classification ANTIVIRAL PROTEIN Compound Radical S-adenosyl methionine domain-containing protein 2 Source (RSAD2_MOUSE) Sequence B:  VNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKQ AGLEKINFSGGEPFLQDRGEYLGKLVRFCKEELALPSVSI VSNGSLIRERWFKDYGEYLDILAISCDSFDEQVNALIGRG QGKKNHVENLQKLRRWCRDYKVAFKINSVINRFNVDEDMN EHIKALSPVRWKVFQCLLIEGENSGEDALREAERFLISNE EFETFLERHKEVSCLVPESNQKMKDSYLILDEYMRFLNCT PSKSILDVGVEEA Description Functional site 1) chain B residue 84 type sequence C description binding site for residue SF4 B 401 source : AC4 2) chain B residue 88 type sequence C description binding site for residue SF4 B 401 source : AC4 3) chain B residue 91 type sequence C description binding site for residue SF4 B 401 source : AC4 4) chain B residue 126 type sequence G description binding site for residue SF4 B 401 source : AC4 5) chain B residue 158 type sequence N description binding site for residue SF4 B 401 source : AC4 6) chain B residue 194 type sequence R description binding site for residue SF4 B 401 source : AC4 7) chain B residue 265 type sequence R description binding site for residue SF4 B 401 source : AC4 8) chain B residue 90 type sequence F description binding site for residue 5AD B 402 source : AC5 9) chain B residue 92 type sequence F description binding site for residue 5AD B 402 source : AC5 10) chain B residue 180 type sequence S description binding site for residue 5AD B 402 source : AC5 11) chain B residue 194 type sequence R description binding site for residue 5AD B 402 source : AC5 12) chain B residue 222 type sequence N description binding site for residue 5AD B 402 source : AC5 13) chain B residue 224 type sequence V description binding site for residue 5AD B 402 source : AC5 14) chain B residue 249 type sequence F description binding site for residue 5AD B 402 source : AC5 15) chain B residue 250 type sequence Q description binding site for residue 5AD B 402 source : AC5 16) chain B residue 251 type sequence C description binding site for residue 5AD B 402 source : AC5 17) chain B residue 252 type sequence L description binding site for residue 5AD B 402 source : AC5 18) chain B residue 258 type sequence N description binding site for residue 5AD B 402 source : AC5 19) chain B residue 92 type sequence F description binding site for residue MET B 403 source : AC6 20) chain B residue 124 type sequence S description binding site for residue MET B 403 source : AC6 21) chain B residue 125 type sequence G description binding site for residue MET B 403 source : AC6 22) chain B residue 126 type sequence G description binding site for residue MET B 403 source : AC6 23) chain B residue 127 type sequence E description binding site for residue MET B 403 source : AC6 24) chain B residue 156 type sequence V description binding site for residue MET B 403 source : AC6 25) chain B residue 157 type sequence S description binding site for residue MET B 403 source : AC6 26) chain B residue 158 type sequence N description binding site for residue MET B 403 source : AC6 27) chain B residue 180 type sequence S description binding site for residue MET B 403 source : AC6 28) chain B residue 194 type sequence R description binding site for residue MET B 403 source : AC6 29) chain B residue 84 type catalytic sequence C description 965 source MCSA : MCSA2 30) chain B residue 88 type catalytic sequence C description 965 source MCSA : MCSA2 31) chain B residue 91 type catalytic sequence C description 965 source MCSA : MCSA2 32) chain B residue 84 type BINDING sequence C description BINDING => ECO:0000269|PubMed:28607080, ECO:0007744|PDB:5VSL, ECO:0007744|PDB:5VSM source Swiss-Prot : SWS_FT_FI1 33) chain B residue 88 type BINDING sequence C description BINDING => ECO:0000269|PubMed:28607080, ECO:0007744|PDB:5VSL, ECO:0007744|PDB:5VSM source Swiss-Prot : SWS_FT_FI1 34) chain B residue 91 type BINDING sequence C description BINDING => ECO:0000269|PubMed:28607080, ECO:0007744|PDB:5VSL, ECO:0007744|PDB:5VSM source Swiss-Prot : SWS_FT_FI1 35) chain B residue 198 type MOD_RES sequence K description N6-acetyllysine => ECO:0000250|UniProtKB:Q8WXG1 source Swiss-Prot : SWS_FT_FI2 36) chain B residue 207 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:Q8WXG1 source Swiss-Prot : SWS_FT_FI3

Display surface Download Links