eF-site ID 5vfr-D
PDB Code 5vfr
Chain D

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Title Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Classification HYDROLASE
Compound 26S proteasome non-ATPase regulatory subunit 1
Source (PSMD2_HUMAN)
Sequence D:  DLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEE
VKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILST
IDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQ
KPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDP
PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK
YLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQ
TGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLD
PALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEV
DLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKD
FEKAYKTVIKKDEQEHEFYK
Description (1)  Activated Human 26S Proteasome


Functional site

1) chain D
residue 168
type
sequence G
description binding site for residue AGS D 501
source : AC4

2) chain D
residue 208
type
sequence P
description binding site for residue AGS D 501
source : AC4

3) chain D
residue 211
type
sequence G
description binding site for residue AGS D 501
source : AC4

4) chain D
residue 212
type
sequence K
description binding site for residue AGS D 501
source : AC4

5) chain D
residue 213
type
sequence T
description binding site for residue AGS D 501
source : AC4

6) chain D
residue 214
type
sequence M
description binding site for residue AGS D 501
source : AC4

7) chain D
residue 217
type
sequence K
description binding site for residue AGS D 501
source : AC4

8) chain D
residue 344
type
sequence I
description binding site for residue AGS D 501
source : AC4

9) chain D
residue 348
type
sequence I
description binding site for residue AGS D 501
source : AC4

10) chain D
residue 372
type
sequence G
description binding site for residue AGS D 501
source : AC4

11) chain D
residue 376
type
sequence N
description binding site for residue AGS D 501
source : AC4

12) chain D
residue 305-323
type prosite
sequence VKVIMATNRADTLDPALLR
description AAA AAA-protein family signature. VkMImATNrpdtLDpALl.R
source prosite : PS00674


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