eF-site ID 5v59-A
PDB Code 5v59
Chain A

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Title Crystal structure of catalytic fragment of human AlaRS in complex with Aze-SA
Classification LIGASE
Compound Alanine--tRNA ligase, cytoplasmic
Source (SYAC_HUMAN)
Sequence A:  TLTASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFAN
AGMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGNDL
DDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQE
FGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTK
ILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVN
QDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLE
RLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGA
EDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLR
RILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELK
KDPDMVKDIINEEEVQFLK
Description


Functional site

1) chain A
residue 77
type
sequence R
description binding site for residue 8X1 A 501
source : AC1

2) chain A
residue 93
type
sequence Y
description binding site for residue 8X1 A 501
source : AC1

3) chain A
residue 94
type
sequence H
description binding site for residue 8X1 A 501
source : AC1

4) chain A
residue 95
type
sequence H
description binding site for residue 8X1 A 501
source : AC1

5) chain A
residue 98
type
sequence F
description binding site for residue 8X1 A 501
source : AC1

6) chain A
residue 100
type
sequence M
description binding site for residue 8X1 A 501
source : AC1

7) chain A
residue 176
type
sequence W
description binding site for residue 8X1 A 501
source : AC1

8) chain A
residue 213
type
sequence E
description binding site for residue 8X1 A 501
source : AC1

9) chain A
residue 214
type
sequence I
description binding site for residue 8X1 A 501
source : AC1

10) chain A
residue 216
type
sequence N
description binding site for residue 8X1 A 501
source : AC1

11) chain A
residue 218
type
sequence V
description binding site for residue 8X1 A 501
source : AC1

12) chain A
residue 239
type
sequence D
description binding site for residue 8X1 A 501
source : AC1

13) chain A
residue 240
type
sequence T
description binding site for residue 8X1 A 501
source : AC1

14) chain A
residue 241
type
sequence G
description binding site for residue 8X1 A 501
source : AC1

15) chain A
residue 243
type
sequence G
description binding site for residue 8X1 A 501
source : AC1

16) chain A
residue 246
type
sequence R
description binding site for residue 8X1 A 501
source : AC1

17) chain A
residue 8
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3

18) chain A
residue 19
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI4

19) chain A
residue 95
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:27622773, ECO:0000269|Ref.24, ECO:0007744|PDB:4XEM, ECO:0007744|PDB:4XEO, ECO:0007744|PDB:5KNN
source Swiss-Prot : SWS_FT_FI1

20) chain A
residue 176
type BINDING
sequence W
description BINDING => ECO:0000269|PubMed:27622773, ECO:0000269|Ref.24, ECO:0007744|PDB:4XEM, ECO:0007744|PDB:4XEO, ECO:0007744|PDB:5KNN
source Swiss-Prot : SWS_FT_FI1

21) chain A
residue 214
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:27622773, ECO:0000269|Ref.24, ECO:0007744|PDB:4XEM, ECO:0007744|PDB:4XEO, ECO:0007744|PDB:5KNN
source Swiss-Prot : SWS_FT_FI1

22) chain A
residue 216
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:27622773, ECO:0000269|Ref.24, ECO:0007744|PDB:4XEM, ECO:0007744|PDB:4XEO, ECO:0007744|PDB:5KNN
source Swiss-Prot : SWS_FT_FI1

23) chain A
residue 239
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:27622773, ECO:0000269|Ref.24, ECO:0007744|PDB:4XEM, ECO:0007744|PDB:4XEO, ECO:0007744|PDB:5KNN
source Swiss-Prot : SWS_FT_FI1

24) chain A
residue 243
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:27622773, ECO:0000269|Ref.24, ECO:0007744|PDB:4XEM, ECO:0007744|PDB:4XEO, ECO:0007744|PDB:5KNN
source Swiss-Prot : SWS_FT_FI1

25) chain A
residue 77
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27622773, ECO:0000269|Ref.24, ECO:0007744|PDB:4XEM, ECO:0007744|PDB:4XEO, ECO:0007744|PDB:5KNN
source Swiss-Prot : SWS_FT_FI1


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