eF-site ID 5t3q-A
PDB Code 5t3q
Chain A

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Title Crystal structure of the c-Met kinase domain in complex with a pyrazolone inhibitor
Classification TRANSFERASE/TRANSFERASE INHIBITOR
Compound Hepatocyte growth factor receptor
Source Homo sapiens (Human) (MET_HUMAN)
Sequence A:  TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGHFGC
VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM
KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN
ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM
LDEKFTVKVADLPVKWMALESLQTQKFTTKSDVWSFGVLL
WELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY
EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH
Description


Functional site

1) chain A
residue 1084
type
sequence I
description binding site for residue 75H A 1401
source : AC1

2) chain A
residue 1092
type
sequence V
description binding site for residue 75H A 1401
source : AC1

3) chain A
residue 1108
type
sequence A
description binding site for residue 75H A 1401
source : AC1

4) chain A
residue 1124
type
sequence F
description binding site for residue 75H A 1401
source : AC1

5) chain A
residue 1127
type
sequence E
description binding site for residue 75H A 1401
source : AC1

6) chain A
residue 1131
type
sequence M
description binding site for residue 75H A 1401
source : AC1

7) chain A
residue 1140
type
sequence L
description binding site for residue 75H A 1401
source : AC1

8) chain A
residue 1157
type
sequence L
description binding site for residue 75H A 1401
source : AC1

9) chain A
residue 1158
type
sequence P
description binding site for residue 75H A 1401
source : AC1

10) chain A
residue 1159
type
sequence Y
description binding site for residue 75H A 1401
source : AC1

11) chain A
residue 1160
type
sequence M
description binding site for residue 75H A 1401
source : AC1

12) chain A
residue 1211
type
sequence M
description binding site for residue 75H A 1401
source : AC1

13) chain A
residue 1221
type
sequence A
description binding site for residue 75H A 1401
source : AC1

14) chain A
residue 1222
type
sequence D
description binding site for residue 75H A 1401
source : AC1

15) chain A
residue 1271
type MOD_RES
sequence V
description Phosphothreonine => ECO:0007744|PubMed:19369195
source Swiss-Prot : SWS_FT_FI7

16) chain A
residue 1331
type MOD_RES
sequence S
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:12475979, ECO:0000269|PubMed:7513258
source Swiss-Prot : SWS_FT_FI8

17) chain A
residue 1338
type MOD_RES
sequence S
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:15735664, ECO:0000269|PubMed:7513258
source Swiss-Prot : SWS_FT_FI9

18) chain A
residue 1084-1110
type prosite
sequence IGHFGCVYHGTLLDNDGKKIHCAVK
description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. IGRGHFGCVYhGtlldndgkkih.......CAVK
source prosite : PS00107

19) chain A
residue 1200-1212
type prosite
sequence FVHRDLAARNCML
description PROTEIN_KINASE_TYR Tyrosine protein kinases specific active-site signature. FVHrDLAARNCML
source prosite : PS00109

20) chain A
residue 1092
type BINDING
sequence V
description
source Swiss-Prot : SWS_FT_FI3

21) chain A
residue 1186
type ACT_SITE
sequence L
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10028
source Swiss-Prot : SWS_FT_FI1

22) chain A
residue 1066
type BINDING
sequence V
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 1347
type MOD_RES
sequence E
description Phosphotyrosine => ECO:0000269|PubMed:12475979
source Swiss-Prot : SWS_FT_FI4

24) chain A
residue 1212
type MOD_RES
sequence L
description Phosphotyrosine => ECO:0000269|PubMed:12475979
source Swiss-Prot : SWS_FT_FI4

25) chain A
residue 1216
type MOD_RES
sequence F
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:12475979
source Swiss-Prot : SWS_FT_FI5

26) chain A
residue 1217
type MOD_RES
sequence T
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:12475979, ECO:0000269|PubMed:1655790
source Swiss-Prot : SWS_FT_FI6


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