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|
eF-site ID
|
5swe-X |
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PDB Code
|
5swe |
|
Chain
|
X |
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click to enlarge
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Title
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Ligand-bound structure of adenine riboswitch aptamer domain converted in crystal from its ligand-free state using ligand mixing serial femtosecond crystallography |
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Classification
|
RNA |
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Compound
|
Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain |
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Source
|
(5SWE) |
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Sequence
|
X: |
GGGAAGAUAUAAUCCUAAUGAUAUGGUUUGGGAGUUUCUA
CCAAGAGCCUUAAACUCUUGAUUAUCUUCCC
|
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Description
|
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Functional site
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|
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1)
|
chain |
X |
| residue |
21 |
| type |
|
| sequence |
A
|
| description |
binding site for residue ADE X 101
|
| source |
: AC1
|
|
|
2)
|
chain |
X |
| residue |
22 |
| type |
|
| sequence |
U
|
| description |
binding site for residue ADE X 101
|
| source |
: AC1
|
|
|
3)
|
chain |
X |
| residue |
47 |
| type |
|
| sequence |
U
|
| description |
binding site for residue ADE X 101
|
| source |
: AC1
|
|
|
4)
|
chain |
X |
| residue |
51 |
| type |
|
| sequence |
U
|
| description |
binding site for residue ADE X 101
|
| source |
: AC1
|
|
|
5)
|
chain |
X |
| residue |
52 |
| type |
|
| sequence |
A
|
| description |
binding site for residue ADE X 101
|
| source |
: AC1
|
|
|
6)
|
chain |
X |
| residue |
75 |
| type |
|
| sequence |
U
|
| description |
binding site for residue ADE X 101
|
| source |
: AC1
|
|
|
|