eF-site ID 5sva-I PDB Code 5sva Chain I click to enlarge Title Mediator-RNA Polymerase II Pre-Initiation Complex Classification TRANSCRIPTION, TRANSFERASE/DNA Compound DNA-directed RNA polymerase II subunit RPB1 Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; Sequence I:  TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSP LVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSR ENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ Description (1)  DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB2, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB4, DNA-directed RNA polymerases I, II, and III subunit RPABC1, DNA-directed RNA polymerases I, II, and III subunit RPABC2, DNA-directed RNA polymerase II subunit RPB7, DNA-directed RNA polymerases I, II, and III subunit RPABC3, DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerases I, II, and III subunit RPABC5, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerases I, II, and III subunit RPABC4, Mediator of RNA polymerase II transcription subunit 6, Mediator of RNA polymerase II transcription subunit 8, Mediator of RNA polymerase II transcription subunit 11, Mediator of RNA polymerase II transcription subunit 17, Mediator of RNA polymerase II transcription subunit 18, Mediator of RNA polymerase II transcription subunit 20, Mediator of RNA polymerase II transcription subunit 22, Mediator of RNA polymerase II transcription subunit 4, Mediator of RNA polymerase II transcription subunit 7, Mediator of RNA polymerase II transcription subunit 9, Mediator of RNA polymerase II transcription subunit 21, Mediator of RNA polymerase II transcription subunit 31, DNA repair helicase RAD3, DNA repair helicase RAD25, RNA polymerase II transcription factor B subunit 2, RNA polymerase II transcription factor B subunit 5, Transcription initiation factor IIB, Transcription initiation factor IIA large subunit, Transcription initiation factor IIA subunit 2, Transcription initiation factor IIF subunit alpha, Transcription initiation factor IIF subunit beta, Transcription initiation factor IIE subunit alpha, Transcription initiation factor IIE subunit beta, TATA-box-binding protein, Transcription initiation factor TFIID subunit 14/DNA Complex Functional site 1) chain I residue 7 type sequence C description binding site for residue ZN I 201 source : AC6 2) chain I residue 10 type sequence C description binding site for residue ZN I 201 source : AC6 3) chain I residue 29 type sequence C description binding site for residue ZN I 201 source : AC6 4) chain I residue 32 type sequence C description binding site for residue ZN I 201 source : AC6 5) chain I residue 75 type sequence C description binding site for residue ZN I 202 source : AC7 6) chain I residue 78 type sequence C description binding site for residue ZN I 202 source : AC7 7) chain I residue 103 type sequence C description binding site for residue ZN I 202 source : AC7 8) chain I residue 106 type sequence C description binding site for residue ZN I 202 source : AC7 9) chain I residue 75-110 type prosite sequence CPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIF description ZF_TFIIS_1 Zinc finger TFIIS-type signature. CpkChsrenvffqSQQRRkDTSmvlffvCls...CshiF source prosite : PS00466 10) chain I residue 6-32 type prosite sequence FCRDCNNMLYPREDKENNRLLFECRTC description RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCrDCNNMLypredkennrllfeCrtC source prosite : PS01030 11) chain I residue 10 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:19779198 source Swiss-Prot : SWS_FT_FI3 12) chain I residue 29 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:19779198 source Swiss-Prot : SWS_FT_FI3 13) chain I residue 32 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:19779198 source Swiss-Prot : SWS_FT_FI3 14) chain I residue 103 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:18407956 source Swiss-Prot : SWS_FT_FI4 15) chain I residue 106 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:18407956 source Swiss-Prot : SWS_FT_FI4

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