eF-site ID 5qjl-B PDB Code 5qjl Chain B click to enlarge Title PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of NUDT5 in complex with Z56983806 Classification HYDROLASE Compound ADP-sugar pyrophosphatase Source (NUDT5_HUMAN) Sequence B:  KQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTT RKQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEF PAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDP GLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLP KNDLLQRLDALVAEEHLTVDARVYSYALALKHAN Description Functional site 1) chain B residue 133 type sequence D description binding site for residue EDO A 304 source : AC3 2) chain B residue 69 type sequence Q description binding site for residue EDO B 301 source : AC5 3) chain B residue 149 type sequence N description binding site for residue EDO B 301 source : AC5 4) chain B residue 151 type sequence D description binding site for residue EDO B 301 source : AC5 5) chain B residue 96 type sequence A description binding site for residue MG B 302 source : AC6 6) chain B residue 116 type sequence E description binding site for residue MG B 302 source : AC6 7) chain B residue 112 type sequence E description binding site for residue MG B 303 source : AC7 8) chain B residue 115 type sequence E description binding site for residue MG B 303 source : AC7 9) chain B residue 116 type sequence E description binding site for residue MG B 303 source : AC7 10) chain B residue 166 type sequence E description binding site for residue MG B 303 source : AC7 11) chain B residue 46 type sequence W description binding site for residue JJM B 304 source : AC8 12) chain B residue 47 type sequence E description binding site for residue JJM B 304 source : AC8 13) chain B residue 135 type sequence G description binding site for residue JJM B 304 source : AC8 14) chain B residue 28 type sequence W description binding site for residue JJM B 305 source : AC9 15) chain B residue 29 type sequence V description binding site for residue JJM B 305 source : AC9 16) chain B residue 51 type sequence R description binding site for residue JJM B 305 source : AC9 17) chain B residue 164 type sequence D description binding site for residue JJM B 305 source : AC9 18) chain B residue 166 type sequence E description binding site for residue JJM B 305 source : AC9 19) chain B residue 51 type sequence R description binding site for residue EDO B 306 source : AD1 20) chain B residue 132 type sequence M description binding site for residue EDO B 306 source : AD1 21) chain B residue 139 type sequence C description binding site for residue EDO B 306 source : AD1 22) chain B residue 28 type BINDING sequence W description in other chain => ECO:0000269|PubMed:17052728, ECO:0000269|PubMed:18462755, ECO:0000269|PubMed:21768126 source Swiss-Prot : SWS_FT_FI1 23) chain B residue 84 type BINDING sequence R description in other chain => ECO:0000269|PubMed:17052728, ECO:0000269|PubMed:18462755, ECO:0000269|PubMed:21768126 source Swiss-Prot : SWS_FT_FI1 24) chain B residue 112 type BINDING sequence E description BINDING => ECO:0000269|PubMed:17052728, ECO:0000269|PubMed:18462755, ECO:0000269|PubMed:21768126 source Swiss-Prot : SWS_FT_FI2 25) chain B residue 116 type BINDING sequence E description BINDING => ECO:0000269|PubMed:17052728, ECO:0000269|PubMed:18462755, ECO:0000269|PubMed:21768126 source Swiss-Prot : SWS_FT_FI2 26) chain B residue 166 type BINDING sequence E description BINDING => ECO:0000269|PubMed:17052728, ECO:0000269|PubMed:18462755, ECO:0000269|PubMed:21768126 source Swiss-Prot : SWS_FT_FI2 27) chain B residue 46 type BINDING sequence W description BINDING => ECO:0000269|PubMed:17052728, ECO:0000269|PubMed:18462755, ECO:0000269|PubMed:21768126 source Swiss-Prot : SWS_FT_FI2 28) chain B residue 51 type BINDING sequence R description BINDING => ECO:0000269|PubMed:17052728, ECO:0000269|PubMed:18462755, ECO:0000269|PubMed:21768126 source Swiss-Prot : SWS_FT_FI2 29) chain B residue 96 type BINDING sequence A description BINDING => ECO:0000269|PubMed:17052728, ECO:0000269|PubMed:18462755, ECO:0000269|PubMed:21768126 source Swiss-Prot : SWS_FT_FI2 30) chain B residue 45 type MOD_RES sequence T description Phosphothreonine => ECO:0000269|PubMed:27257257 source Swiss-Prot : SWS_FT_FI7 31) chain B residue 74 type MOD_RES sequence Y description Phosphotyrosine => ECO:0007744|PubMed:15592455 source Swiss-Prot : SWS_FT_FI8 32) chain B residue 42 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733 source Swiss-Prot : SWS_FT_FI9 33) chain B residue 98 type BINDING sequence L description in other chain => ECO:0000269|PubMed:17052728 source Swiss-Prot : SWS_FT_FI3 34) chain B residue 133 type BINDING sequence D description in other chain => ECO:0000269|PubMed:17052728 source Swiss-Prot : SWS_FT_FI3

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