eF-site ID 5opq-ABCD
PDB Code 5opq
Chain A, B, C, D

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Title A 3,6-anhydro-D-galactosidase produced by Zobellia galactanivorans. This is an exo-lytic enzyme that hydrolyzes terminal 3,6-anhydro-D-galactose from the non-reducing end of carrageenan oligosaccharides.
Classification HYDROLASE
Compound 3,6-anhydro-D-galactosidase
Source (G0L004_ZOBGA)
Sequence A:  PIVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAA
GLLTLTDSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDP
VFEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTL
YDLRYPARAFSLKTDEDKGAAVIPQKQGVICPSYIFPMNG
GRFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKS
AVMGIVDVSARPHMQYNINNNGQYLFNAKGVMSPYQRIVF
LDPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKAR
GHFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGM
AFTFDELKNIIKTIHDDLRVDKAFVHAWGTFSNFVPHNYP
ISEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPN
FTTDLMQRDAEGKLMNTGSRWARVDPKFQKGLAQKNIEKE
ISYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVN
GTEHGQEQWIPYFDMFEGMTYLEDRPLSVISHPAPLFNLV
YHEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTI
FFAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLS
ADYKVQRSRFSSGTEVIANLGPVAQKIEGGISIPGYGYRI
QMKDGSLKTGHFQVSLHMD
B:  PIVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAA
GLLTLTDSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDP
VFEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTL
YDLRYPARAFSLKTDEDKGAAVIPQKQGVICPSYIFPMNG
GRFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKS
AVMGIVDVSARPHMQYNINNNGQYLFNAKGVMSPYQRIVF
LDPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKAR
GHFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGM
AFTFDELKNIIKTIHDDLRVDKAFVHAWGTFSNFVPHNYP
ISEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPN
FTTDLMQRDAEGKLMNTGSRWARVDPKFQKGLAQKNIEKE
ISYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVN
GTEHGQEQWIPYFDMFEGMTYLEDRPLSVISHPAPLFNLV
YHEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTI
FFAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLS
ADYKVQRSRFSSGTEVIANLGPVAQKIEGGISIPGYGYRI
QMKDGSLKTGHFQVSLHMD
C:  PIVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAA
GLLTLTDSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDP
VFEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTL
YDLRYPARAFSLKTDEDKGAAVIPQKQGVICPSYIFPMNG
GRFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKS
AVMGIVDVSARPHMQYNINNNGQYLFNAKGVMSPYQRIVF
LDPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKAR
GHFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGM
AFTFDELKNIIKTIHDDLRVDKAFVHAWGTFSNFVPHNYP
ISEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPN
FTTDLMQRDAEGKLMNTGSRWARVDPKFQKGLAQKNIEKE
ISYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVN
GTEHGQEQWIPYFDMFEGMTYLEDRPLSVISHPAPLFNLV
YHEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTI
FFAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLS
ADYKVQRSRFSSGTEVIANLGPVAQKIEGGISIPGYGYRI
QMKDGSLKTGHFQVSLHMD
D:  IVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAAG
LLTLTDSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDPV
FEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTLY
DLRYPARAFSLKTDEDKGAAVIPQKQGVICPSYIFPMNGG
RFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKSA
VMGIVDVSARPHMQYNINNNGQYLFNAKGVMSPYQRIVFL
DPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKARG
HFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGMA
FTFDELKNIIKTIHDDLRVDKAFVHAWGTFSNFVPHNYPI
SEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPNF
TTDLMQRDAEGKLMNTGSRWARVDPKFQKGLAQKNIEKEI
SYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVNG
TEHGQEQWIPYFDMFEGMTYLEDRPLSVISHPAPLFNLVY
HEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTIF
FAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLSA
DYKVQRSRFSSGTEVIANLGPVAQKIEGGISIPGYGYRIQ
MKDGSLKTGHFQVSLHMD
Description


Functional site

1) chain A
residue 218
type
sequence N
description binding site for residue MPD A 701
source : AC1

2) chain A
residue 219
type
sequence G
description binding site for residue MPD A 701
source : AC1

3) chain A
residue 536
type
sequence L
description binding site for residue MPD A 701
source : AC1

4) chain A
residue 566
type
sequence Q
description binding site for residue MPD A 701
source : AC1

5) chain A
residue 536
type
sequence L
description binding site for residue MPD A 702
source : AC2

6) chain A
residue 537
type
sequence E
description binding site for residue MPD A 702
source : AC2

7) chain A
residue 538
type
sequence D
description binding site for residue MPD A 702
source : AC2

8) chain A
residue 347
type
sequence H
description binding site for residue TRS A 703
source : AC3

9) chain A
residue 486
type
sequence D
description binding site for residue TRS A 703
source : AC3

10) chain A
residue 487
type
sequence I
description binding site for residue TRS A 703
source : AC3

11) chain A
residue 517
type
sequence E
description binding site for residue TRS A 703
source : AC3

12) chain A
residue 564
type
sequence K
description binding site for residue TRS A 703
source : AC3

13) chain A
residue 565
type
sequence I
description binding site for residue TRS A 703
source : AC3

14) chain A
residue 566
type
sequence Q
description binding site for residue TRS A 703
source : AC3

15) chain B
residue 198
type
sequence C
description binding site for residue TRS A 703
source : AC3

16) chain B
residue 202
type
sequence D
description binding site for residue TRS A 703
source : AC3

17) chain A
residue 590
type
sequence R
description binding site for residue CL A 704
source : AC4

18) chain A
residue 208
type
sequence K
description binding site for residue MPD B 701
source : AC5

19) chain B
residue 537
type
sequence E
description binding site for residue MPD B 701
source : AC5

20) chain B
residue 538
type
sequence D
description binding site for residue MPD B 701
source : AC5

21) chain A
residue 198
type
sequence C
description binding site for residue TRS B 702
source : AC6

22) chain A
residue 202
type
sequence D
description binding site for residue TRS B 702
source : AC6

23) chain B
residue 347
type
sequence H
description binding site for residue TRS B 702
source : AC6

24) chain B
residue 455
type
sequence W
description binding site for residue TRS B 702
source : AC6

25) chain B
residue 486
type
sequence D
description binding site for residue TRS B 702
source : AC6

26) chain B
residue 487
type
sequence I
description binding site for residue TRS B 702
source : AC6

27) chain B
residue 517
type
sequence E
description binding site for residue TRS B 702
source : AC6

28) chain B
residue 564
type
sequence K
description binding site for residue TRS B 702
source : AC6

29) chain B
residue 566
type
sequence Q
description binding site for residue TRS B 702
source : AC6

30) chain B
residue 590
type
sequence R
description binding site for residue CL B 703
source : AC7

31) chain C
residue 218
type
sequence N
description binding site for residue MPD C 701
source : AC8

32) chain C
residue 219
type
sequence G
description binding site for residue MPD C 701
source : AC8

33) chain C
residue 536
type
sequence L
description binding site for residue MPD C 701
source : AC8

34) chain C
residue 566
type
sequence Q
description binding site for residue MPD C 701
source : AC8

35) chain C
residue 347
type
sequence H
description binding site for residue TRS C 702
source : AC9

36) chain C
residue 455
type
sequence W
description binding site for residue TRS C 702
source : AC9

37) chain C
residue 486
type
sequence D
description binding site for residue TRS C 702
source : AC9

38) chain C
residue 487
type
sequence I
description binding site for residue TRS C 702
source : AC9

39) chain C
residue 517
type
sequence E
description binding site for residue TRS C 702
source : AC9

40) chain C
residue 564
type
sequence K
description binding site for residue TRS C 702
source : AC9

41) chain C
residue 566
type
sequence Q
description binding site for residue TRS C 702
source : AC9

42) chain D
residue 198
type
sequence C
description binding site for residue TRS C 702
source : AC9

43) chain D
residue 202
type
sequence D
description binding site for residue TRS C 702
source : AC9

44) chain C
residue 537
type
sequence E
description binding site for residue TRS C 703
source : AD1

45) chain C
residue 538
type
sequence D
description binding site for residue TRS C 703
source : AD1

46) chain D
residue 208
type
sequence K
description binding site for residue TRS C 703
source : AD1

47) chain C
residue 590
type
sequence R
description binding site for residue CL C 704
source : AD2

48) chain D
residue 536
type
sequence L
description binding site for residue MPD D 701
source : AD3

49) chain D
residue 537
type
sequence E
description binding site for residue MPD D 701
source : AD3

50) chain D
residue 538
type
sequence D
description binding site for residue MPD D 701
source : AD3

51) chain C
residue 198
type
sequence C
description binding site for residue TRS D 702
source : AD4

52) chain C
residue 202
type
sequence D
description binding site for residue TRS D 702
source : AD4

53) chain D
residue 346
type
sequence P
description binding site for residue TRS D 702
source : AD4

54) chain D
residue 347
type
sequence H
description binding site for residue TRS D 702
source : AD4

55) chain D
residue 422
type
sequence Y
description binding site for residue TRS D 702
source : AD4

56) chain D
residue 455
type
sequence W
description binding site for residue TRS D 702
source : AD4

57) chain D
residue 486
type
sequence D
description binding site for residue TRS D 702
source : AD4

58) chain D
residue 487
type
sequence I
description binding site for residue TRS D 702
source : AD4

59) chain D
residue 517
type
sequence E
description binding site for residue TRS D 702
source : AD4

60) chain D
residue 564
type
sequence K
description binding site for residue TRS D 702
source : AD4

61) chain D
residue 565
type
sequence I
description binding site for residue TRS D 702
source : AD4

62) chain D
residue 566
type
sequence Q
description binding site for residue TRS D 702
source : AD4

63) chain D
residue 590
type
sequence R
description binding site for residue CL D 703
source : AD5


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