eF-site ID 5opq-ABCD PDB Code 5opq Chain A, B, C, D click to enlarge Title A 3,6-anhydro-D-galactosidase produced by Zobellia galactanivorans. This is an exo-lytic enzyme that hydrolyzes terminal 3,6-anhydro-D-galactose from the non-reducing end of carrageenan oligosaccharides. Classification HYDROLASE Compound 3,6-anhydro-D-galactosidase Source (G0L004_ZOBGA) Sequence A:  PIVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAA GLLTLTDSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDP VFEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTL YDLRYPARAFSLKTDEDKGAAVIPQKQGVICPSYIFPMNG GRFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKS AVMGIVDVSARPHMQYNINNNGQYLFNAKGVMSPYQRIVF LDPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKAR GHFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGM AFTFDELKNIIKTIHDDLRVDKAFVHAWGTFSNFVPHNYP ISEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPN FTTDLMQRDAEGKLMNTGSRWARVDPKFQKGLAQKNIEKE ISYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVN GTEHGQEQWIPYFDMFEGMTYLEDRPLSVISHPAPLFNLV YHEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTI FFAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLS ADYKVQRSRFSSGTEVIANLGPVAQKIEGGISIPGYGYRI QMKDGSLKTGHFQVSLHMD B:  PIVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAA GLLTLTDSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDP VFEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTL YDLRYPARAFSLKTDEDKGAAVIPQKQGVICPSYIFPMNG GRFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKS AVMGIVDVSARPHMQYNINNNGQYLFNAKGVMSPYQRIVF LDPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKAR GHFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGM AFTFDELKNIIKTIHDDLRVDKAFVHAWGTFSNFVPHNYP ISEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPN FTTDLMQRDAEGKLMNTGSRWARVDPKFQKGLAQKNIEKE ISYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVN GTEHGQEQWIPYFDMFEGMTYLEDRPLSVISHPAPLFNLV YHEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTI FFAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLS ADYKVQRSRFSSGTEVIANLGPVAQKIEGGISIPGYGYRI QMKDGSLKTGHFQVSLHMD C:  PIVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAA GLLTLTDSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDP VFEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTL YDLRYPARAFSLKTDEDKGAAVIPQKQGVICPSYIFPMNG GRFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKS AVMGIVDVSARPHMQYNINNNGQYLFNAKGVMSPYQRIVF LDPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKAR GHFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGM AFTFDELKNIIKTIHDDLRVDKAFVHAWGTFSNFVPHNYP ISEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPN FTTDLMQRDAEGKLMNTGSRWARVDPKFQKGLAQKNIEKE ISYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVN GTEHGQEQWIPYFDMFEGMTYLEDRPLSVISHPAPLFNLV YHEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTI FFAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLS ADYKVQRSRFSSGTEVIANLGPVAQKIEGGISIPGYGYRI QMKDGSLKTGHFQVSLHMD D:  IVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAAG LLTLTDSKGKKQTVNISKSKKIEVSKTAKNTVSLKFIDPV FEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTLY DLRYPARAFSLKTDEDKGAAVIPQKQGVICPSYIFPMNGG RFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKSA VMGIVDVSARPHMQYNINNNGQYLFNAKGVMSPYQRIVFL DPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKARG HFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGMA FTFDELKNIIKTIHDDLRVDKAFVHAWGTFSNFVPHNYPI SEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPNF TTDLMQRDAEGKLMNTGSRWARVDPKFQKGLAQKNIEKEI SYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVNG TEHGQEQWIPYFDMFEGMTYLEDRPLSVISHPAPLFNLVY HEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTIF FAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLSA DYKVQRSRFSSGTEVIANLGPVAQKIEGGISIPGYGYRIQ MKDGSLKTGHFQVSLHMD Description Functional site 1) chain A residue 218 type sequence N description binding site for residue MPD A 701 source : AC1 2) chain A residue 219 type sequence G description binding site for residue MPD A 701 source : AC1 3) chain A residue 536 type sequence L description binding site for residue MPD A 701 source : AC1 4) chain A residue 566 type sequence Q description binding site for residue MPD A 701 source : AC1 5) chain A residue 536 type sequence L description binding site for residue MPD A 702 source : AC2 6) chain A residue 537 type sequence E description binding site for residue MPD A 702 source : AC2 7) chain A residue 538 type sequence D description binding site for residue MPD A 702 source : AC2 8) chain A residue 347 type sequence H description binding site for residue TRS A 703 source : AC3 9) chain A residue 486 type sequence D description binding site for residue TRS A 703 source : AC3 10) chain A residue 487 type sequence I description binding site for residue TRS A 703 source : AC3 11) chain A residue 517 type sequence E description binding site for residue TRS A 703 source : AC3 12) chain A residue 564 type sequence K description binding site for residue TRS A 703 source : AC3 13) chain A residue 565 type sequence I description binding site for residue TRS A 703 source : AC3 14) chain A residue 566 type sequence Q description binding site for residue TRS A 703 source : AC3 15) chain B residue 198 type sequence C description binding site for residue TRS A 703 source : AC3 16) chain B residue 202 type sequence D description binding site for residue TRS A 703 source : AC3 17) chain A residue 590 type sequence R description binding site for residue CL A 704 source : AC4 18) chain A residue 208 type sequence K description binding site for residue MPD B 701 source : AC5 19) chain B residue 537 type sequence E description binding site for residue MPD B 701 source : AC5 20) chain B residue 538 type sequence D description binding site for residue MPD B 701 source : AC5 21) chain A residue 198 type sequence C description binding site for residue TRS B 702 source : AC6 22) chain A residue 202 type sequence D description binding site for residue TRS B 702 source : AC6 23) chain B residue 347 type sequence H description binding site for residue TRS B 702 source : AC6 24) chain B residue 455 type sequence W description binding site for residue TRS B 702 source : AC6 25) chain B residue 486 type sequence D description binding site for residue TRS B 702 source : AC6 26) chain B residue 487 type sequence I description binding site for residue TRS B 702 source : AC6 27) chain B residue 517 type sequence E description binding site for residue TRS B 702 source : AC6 28) chain B residue 564 type sequence K description binding site for residue TRS B 702 source : AC6 29) chain B residue 566 type sequence Q description binding site for residue TRS B 702 source : AC6 30) chain B residue 590 type sequence R description binding site for residue CL B 703 source : AC7 31) chain C residue 218 type sequence N description binding site for residue MPD C 701 source : AC8 32) chain C residue 219 type sequence G description binding site for residue MPD C 701 source : AC8 33) chain C residue 536 type sequence L description binding site for residue MPD C 701 source : AC8 34) chain C residue 566 type sequence Q description binding site for residue MPD C 701 source : AC8 35) chain C residue 347 type sequence H description binding site for residue TRS C 702 source : AC9 36) chain C residue 455 type sequence W description binding site for residue TRS C 702 source : AC9 37) chain C residue 486 type sequence D description binding site for residue TRS C 702 source : AC9 38) chain C residue 487 type sequence I description binding site for residue TRS C 702 source : AC9 39) chain C residue 517 type sequence E description binding site for residue TRS C 702 source : AC9 40) chain C residue 564 type sequence K description binding site for residue TRS C 702 source : AC9 41) chain C residue 566 type sequence Q description binding site for residue TRS C 702 source : AC9 42) chain D residue 198 type sequence C description binding site for residue TRS C 702 source : AC9 43) chain D residue 202 type sequence D description binding site for residue TRS C 702 source : AC9 44) chain C residue 537 type sequence E description binding site for residue TRS C 703 source : AD1 45) chain C residue 538 type sequence D description binding site for residue TRS C 703 source : AD1 46) chain D residue 208 type sequence K description binding site for residue TRS C 703 source : AD1 47) chain C residue 590 type sequence R description binding site for residue CL C 704 source : AD2 48) chain D residue 536 type sequence L description binding site for residue MPD D 701 source : AD3 49) chain D residue 537 type sequence E description binding site for residue MPD D 701 source : AD3 50) chain D residue 538 type sequence D description binding site for residue MPD D 701 source : AD3 51) chain C residue 198 type sequence C description binding site for residue TRS D 702 source : AD4 52) chain C residue 202 type sequence D description binding site for residue TRS D 702 source : AD4 53) chain D residue 346 type sequence P description binding site for residue TRS D 702 source : AD4 54) chain D residue 347 type sequence H description binding site for residue TRS D 702 source : AD4 55) chain D residue 422 type sequence Y description binding site for residue TRS D 702 source : AD4 56) chain D residue 455 type sequence W description binding site for residue TRS D 702 source : AD4 57) chain D residue 486 type sequence D description binding site for residue TRS D 702 source : AD4 58) chain D residue 487 type sequence I description binding site for residue TRS D 702 source : AD4 59) chain D residue 517 type sequence E description binding site for residue TRS D 702 source : AD4 60) chain D residue 564 type sequence K description binding site for residue TRS D 702 source : AD4 61) chain D residue 565 type sequence I description binding site for residue TRS D 702 source : AD4 62) chain D residue 566 type sequence Q description binding site for residue TRS D 702 source : AD4 63) chain D residue 590 type sequence R description binding site for residue CL D 703 source : AD5

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