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eF-site ID
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5oom-w |
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PDB Code
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5oom |
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Chain
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w |
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click to enlarge
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Title
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Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA |
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Classification
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RIBOSOME |
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Compound
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16S ribosomal RNA |
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Source
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ORGANISM_COMMON: Human; ORGANISM_SCIENTIFIC: Homo sapiens; |
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Sequence
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w: |
LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSL
DQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKK
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Description
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Functional site
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1)
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chain |
w |
| residue |
111 |
| type |
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| sequence |
D
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| description |
binding site for residue PNS v 101
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| source |
: AG8
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2)
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chain |
w |
| residue |
112 |
| type |
|
| sequence |
S
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| description |
binding site for residue PNS v 101
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| source |
: AG8
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3)
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chain |
w |
| residue |
88 |
| type |
MOD_RES |
| sequence |
K
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| description |
N6-acetyllysine => ECO:0000250|UniProtKB:Q9CR21
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| source |
Swiss-Prot : SWS_FT_FI1
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4)
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chain |
w |
| residue |
112 |
| type |
MOD_RES |
| sequence |
S
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| description |
O-(pantetheine 4'-phosphoryl)serine => ECO:0000255|PROSITE-ProRule:PRU00258, ECO:0000269|PubMed:31664822, ECO:0007744|PDB:6ODD
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| source |
Swiss-Prot : SWS_FT_FI2
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5)
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chain |
w |
| residue |
107-122 |
| type |
prosite |
| sequence |
DLGLDSLDQVEIIMAM
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| description |
PHOSPHOPANTETHEINE Phosphopantetheine attachment site. DLGLDSLDQVEIIMAM
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| source |
prosite : PS00012
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6)
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chain |
w |
| residue |
132-144 |
| type |
prosite |
| sequence |
DIDAEKLMCPQEI
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| description |
EF_HAND_1 EF-hand calcium-binding domain. DIDAEKLMCpqEI
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| source |
prosite : PS00018
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