eF-site ID 5oom-AB
PDB Code 5oom
Chain A, B

click to enlarge
Title Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
Classification RIBOSOME
Compound 16S ribosomal RNA
Source ORGANISM_COMMON: Human; ORGANISM_SCIENTIFIC: Homo sapiens;
Sequence A:  GCUAAACCUAGCCCCAAACCCACUCCACCUUACUACCAAA
CCUUAGCCAAACCAUUUACAUAAAGUAUAGGCGAUAGAAA
UUGGGCGCAAUAGAUAUAGUACCGCAAGGGAAAGAUGAAA
AAUACCAAGCAUAAUAUAGCAAGGACUAACCCCUAUACCU
UCUGAUGAAUUAACUAGAAAUAACUUUGCAAGGAGAGCCA
AAGCUAAGACCCCCGAAACCAGACGAGCUACCUAAGAACA
GAUUUAUAGGUAGAGGCGACAAACCUACCGAGCCUGGUGA
UAGCUGGUUGUCCAAGAUAGAAUCUUAGUUCAACUUUAAA
UUUGCCCACAGAACCAAAUCCCCUUGUAAAUUUAACUGUU
AGUCCAAAGAGGAACAGCUCUUUGGACACUAGGAAAAAAC
CUUGUAGAGAGAGUAAAAAAUUUAACACCCAUAGUAGGCC
UAAAAGCAGCCACCAAUUAAGAAAGCGUUCAAGCUCAACA
CCUCCCAAACAUAUAACUGAACUCCUCACACCCAAUUGGA
CCAAUCUAUCACCCUAUAGAAGAACUAAUGUUAGUAUAAG
UAACAUGAAAACAUUCUCCUCCGCAUAAGCCUGCGUCAGA
UCACUGACAAUUAACAGCCCAAUAUCUACAAUCAACCAAC
AAGUCAUUAUUACCCUCACUGUCAACCCAACAGGCAUGCU
CAUAAGGAAAGGUUAAAAAAAGUAAAAGGAAACAUCACCU
CUAGCAUCACCAGUAUUAGAGGCCAGCUGUCUCUUACUUU
UAACCAGUGAAAUUGACCUGCCCGUGAGGCGGGCAUAACA
CAGCAAGACGAGACCCUAUGGAGCUUUAAUUUAUUAAUGC
AAACACCUGCAUUAAAAAUUUCGGUUGGGGCGACCUCGGA
GCAGAACCCAACCUCCGAGCAGUACAUGCUAAGACUUCAC
CAGUCAAAGCGAACCUCAAUUGAUCCAAUAACUUGACCAA
CGGAACAAGUUACCCUAGGGUAUCUACUUUAUUCCUCCCU
GUACGAAAGGACAAGAGAAAUAAGGCCUACUUCACAAAGC
GCCUUCUAAAUGAUAUCAUCUCAACUUAAUACCCACACCC
AAGAACAGGGUU
B:  AGAGUGUAGCUUAAAAGCACCCAACUUACACUUAGGAGAU
UCAAUUGACGCUCUGA
Description


Functional site

1) chain A
residue 2864
type
sequence U
description binding site for residue MG A 3301
source : AC1

2) chain A
residue 2866
type
sequence A
description binding site for residue MG A 3301
source : AC1

3) chain A
residue 2867
type
sequence C
description binding site for residue MG A 3301
source : AC1

4) chain A
residue 1739
type
sequence A
description binding site for residue MG A 3302
source : AC2

5) chain A
residue 1757
type
sequence A
description binding site for residue MG A 3302
source : AC2

6) chain A
residue 1758
type
sequence U
description binding site for residue MG A 3302
source : AC2

7) chain A
residue 1759
type
sequence U
description binding site for residue MG A 3302
source : AC2

8) chain A
residue 1723
type
sequence A
description binding site for residue MG A 3303
source : AC3

9) chain A
residue 1725
type
sequence C
description binding site for residue MG A 3303
source : AC3

10) chain A
residue 1726
type
sequence C
description binding site for residue MG A 3303
source : AC3

11) chain A
residue 1776
type
sequence G
description binding site for residue MG A 3304
source : AC4

12) chain A
residue 1778
type
sequence U
description binding site for residue MG A 3304
source : AC4

13) chain A
residue 1814
type
sequence A
description binding site for residue MG A 3305
source : AC5

14) chain A
residue 1815
type
sequence A
description binding site for residue MG A 3305
source : AC5

15) chain A
residue 1816
type
sequence G
description binding site for residue MG A 3305
source : AC5

16) chain A
residue 1776
type
sequence G
description binding site for residue MG A 3306
source : AC6

17) chain A
residue 1779
type
sequence A
description binding site for residue MG A 3306
source : AC6

18) chain A
residue 1918
type
sequence G
description binding site for residue MG A 3307
source : AC7

19) chain A
residue 2011
type
sequence G
description binding site for residue MG A 3308
source : AC8

20) chain A
residue 2027
type
sequence A
description binding site for residue MG A 3309
source : AC9

21) chain A
residue 2141
type
sequence U
description binding site for residue MG A 3310
source : AD1

22) chain A
residue 2252
type
sequence C
description binding site for residue MG A 3310
source : AD1

23) chain A
residue 2253
type
sequence U
description binding site for residue MG A 3310
source : AD1

24) chain A
residue 2336
type
sequence U
description binding site for residue MG A 3311
source : AD2

25) chain A
residue 2423
type
sequence C
description binding site for residue MG A 3311
source : AD2

26) chain A
residue 2317
type
sequence G
description binding site for residue MG A 3312
source : AD3

27) chain A
residue 2450
type
sequence A
description binding site for residue MG A 3312
source : AD3

28) chain A
residue 2451
type
sequence A
description binding site for residue MG A 3312
source : AD3

29) chain A
residue 2452
type
sequence A
description binding site for residue MG A 3312
source : AD3

30) chain A
residue 2313
type
sequence A
description binding site for residue MG A 3314
source : AD4

31) chain A
residue 2668
type
sequence A
description binding site for residue MG A 3314
source : AD4

32) chain A
residue 2298
type
sequence A
description binding site for residue MG A 3315
source : AD5

33) chain A
residue 2300
type
sequence G
description binding site for residue MG A 3315
source : AD5

34) chain A
residue 2020
type
sequence U
description binding site for residue MG A 3316
source : AD6

35) chain A
residue 2297
type
sequence A
description binding site for residue MG A 3316
source : AD6

36) chain A
residue 1841
type
sequence U
description binding site for residue MG A 3318
source : AD7

37) chain A
residue 1842
type
sequence A
description binding site for residue MG A 3318
source : AD7

38) chain A
residue 2468
type
sequence A
description binding site for residue MG A 3321
source : AD8

39) chain A
residue 2469
type
sequence A
description binding site for residue MG A 3321
source : AD8

40) chain A
residue 2448
type
sequence G
description binding site for residue MG A 3322
source : AD9

41) chain A
residue 2468
type
sequence A
description binding site for residue MG A 3323
source : AE1

42) chain A
residue 2732
type
sequence G
description binding site for residue MG A 3324
source : AE2

43) chain A
residue 2733
type
sequence G
description binding site for residue MG A 3324
source : AE2

44) chain A
residue 2808
type
sequence U
description binding site for residue MG A 3324
source : AE2

45) chain A
residue 2309
type
sequence A
description binding site for residue MG A 3325
source : AE3

46) chain A
residue 3102
type
sequence U
description binding site for residue MG A 3325
source : AE3

47) chain A
residue 2875
type
sequence A
description binding site for residue MG A 3326
source : AE4

48) chain A
residue 2035
type
sequence U
description binding site for residue MG A 3327
source : AE5

49) chain A
residue 2036
type
sequence C
description binding site for residue MG A 3327
source : AE5

50) chain A
residue 2917
type
sequence G
description binding site for residue MG A 3327
source : AE5

51) chain A
residue 2918
type
sequence A
description binding site for residue MG A 3327
source : AE5

52) chain A
residue 1907
type
sequence A
description binding site for residue MG A 3328
source : AE6

53) chain A
residue 1859
type
sequence A
description binding site for residue MG A 3329
source : AE7

54) chain A
residue 2680
type
sequence U
description binding site for residue MG A 3329
source : AE7

55) chain A
residue 2691
type
sequence U
description binding site for residue MG A 3330
source : AE8

56) chain A
residue 2696
type
sequence A
description binding site for residue MG A 3330
source : AE8

57) chain A
residue 2015
type
sequence G
description binding site for residue MG A 3331
source : AE9

58) chain A
residue 2038
type
sequence U
description binding site for residue MG A 3331
source : AE9

59) chain A
residue 2039
type
sequence A
description binding site for residue MG A 3331
source : AE9

60) chain A
residue 2040
type
sequence G
description binding site for residue MG A 3331
source : AE9

61) chain A
residue 2731
type
sequence U
description binding site for residue MG A 3331
source : AE9

62) chain A
residue 2037
type
sequence U
description binding site for residue MG A 3332
source : AF1

63) chain A
residue 2038
type
sequence U
description binding site for residue MG A 3332
source : AF1

64) chain A
residue 2731
type
sequence U
description binding site for residue MG A 3332
source : AF1

65) chain A
residue 2036
type
sequence C
description binding site for residue MG A 3333
source : AF2

66) chain A
residue 2914
type
sequence A
description binding site for residue MG A 3333
source : AF2

67) chain A
residue 2915
type
sequence C
description binding site for residue MG A 3333
source : AF2

68) chain A
residue 2035
type
sequence U
description binding site for residue MG A 3334
source : AF3

69) chain A
residue 2915
type
sequence C
description binding site for residue MG A 3334
source : AF3

70) chain A
residue 2916
type
sequence G
description binding site for residue MG A 3334
source : AF3

71) chain A
residue 2917
type
sequence G
description binding site for residue MG A 3334
source : AF3

72) chain A
residue 2836
type
sequence C
description binding site for residue MG A 3336
source : AF4

73) chain A
residue 2837
type
sequence A
description binding site for residue MG A 3336
source : AF4

74) chain A
residue 2293
type
sequence A
description binding site for residue MG A 3337
source : AF5

75) chain A
residue 2294
type
sequence A
description binding site for residue MG A 3337
source : AF5

76) chain A
residue 1864
type
sequence A
description binding site for residue MG A 3338
source : AF6

77) chain A
residue 1778
type
sequence U
description binding site for residue MG A 3339
source : AF7

78) chain A
residue 1779
type
sequence A
description binding site for residue MG A 3339
source : AF7

79) chain A
residue 1795
type
sequence A
description binding site for residue MG A 3339
source : AF7

80) chain A
residue 2079
type
sequence C
description binding site for residue MG A 3341
source : AF8

81) chain A
residue 2273
type
sequence A
description binding site for residue MG A 3342
source : AF9

82) chain A
residue 2373
type
sequence A
description binding site for residue MG A 3344
source : AG1

83) chain A
residue 2422
type
sequence U
description binding site for residue MG A 3344
source : AG1

84) chain A
residue 2375
type
sequence C
description binding site for residue MG A 3345
source : AG2

85) chain A
residue 2462
type
sequence A
description binding site for residue MG A 3346
source : AG3

86) chain A
residue 2250
type
sequence A
description binding site for residue MG A 3347
source : AG4


Display surface

Download
Links