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|
eF-site ID
|
5onw-D |
|
PDB Code
|
5onw |
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Chain
|
D |
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click to enlarge
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Title
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X-Ray crystal structure of a nucleosome core particle with its DNA site-specifically crosslinked to the histone octamer and the two H2A/H2B dimers crosslinked via H2A N38C |
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Classification
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DNA BINDING PROTEIN |
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Compound
|
DNA (147-MER) |
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Source
|
Xenopus laevis (African clawed frog) (H2B11_XENLA) |
|
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Sequence
|
D: |
RRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVND
VFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAK
HAVSEGTKAVTKYTSA
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Description
|
|
Functional site
|
|
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1)
|
chain |
D |
| residue |
87 |
| type |
|
| sequence |
T
|
| description |
binding site for residue CL C 201
|
| source |
: AE2
|
|
|
2)
|
chain |
D |
| residue |
88 |
| type |
|
| sequence |
S
|
| description |
binding site for residue CL C 201
|
| source |
: AE2
|
|
|
3)
|
chain |
D |
| residue |
120 |
| type |
|
| sequence |
S
|
| description |
binding site for residue MN D 201
|
| source |
: AE3
|
|
|
4)
|
chain |
D |
| residue |
45 |
| type |
|
| sequence |
V
|
| description |
binding site for residue MN E 201
|
| source |
: AE4
|
|
|
5)
|
chain |
D |
| residue |
89-111 |
| type |
prosite |
| sequence |
REIQTAVRLLLPGELAKHAVSEG
|
| description |
HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
|
| source |
prosite : PS00357
|
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