eF-site ID 5ong-E
PDB Code 5ong
Chain E

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Title X-Ray crystal structure of a nucleosome core particle with its DNA site-specifically crosslinked to the histone octamer
Classification DNA BINDING PROTEIN
Compound DNA (147-MER)
Source Xenopus laevis (African clawed frog) (H2B11_XENLA)
Sequence E:  HCYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDF
KTDLRFQSSAVMALQEASEAYLVALFEDTNLAAIHAKRVT
IMPKDIQLARRIRGERA
Description


Functional site

1) chain E
residue 77
type
sequence D
description binding site for residue MN E 201
source : AE2

2) chain E
residue 121
type
sequence P
description binding site for residue CL E 202
source : AE3

3) chain E
residue 122
type
sequence K
description binding site for residue CL E 202
source : AE3

4) chain E
residue 39
type
sequence H
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

5) chain E
residue 41
type
sequence Y
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

6) chain E
residue 66
type
sequence P
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

7) chain E
residue 67
type
sequence F
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

8) chain E
residue 68
type
sequence Q
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

9) chain E
residue 69
type
sequence R
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

10) chain E
residue 71
type
sequence V
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

11) chain E
residue 72
type
sequence R
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

12) chain E
residue 73
type
sequence E
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

13) chain E
residue 74
type
sequence I
description binding site for Di-peptide CYS E 40 and G47 J 70
source : AE5

14) chain E
residue 86
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P84243
source Swiss-Prot : SWS_FT_FI18

15) chain E
residue 115
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI19

16) chain E
residue 122
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI20

17) chain E
residue 110
type LIPID
sequence A
description S-palmitoyl cysteine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI21

18) chain E
residue 64
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI10

19) chain E
residue 41
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI14

20) chain E
residue 56
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

21) chain E
residue 79
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

22) chain E
residue 57
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI16

23) chain E
residue 80
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI17

24) chain E
residue 107
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI17


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