eF-site ID 5oct-F
PDB Code 5oct
Chain F

click to enlarge
Title Discovery of small molecules binding to KRAS via high affinity antibody fragment competition method.
Classification HYDROLASE
Compound GTPase KRas
Source (RASK_HUMAN)
Sequence F:  YFQGMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI
EDSYRKQVVIDGETXLLDILDTAGRDQYMRTGEGFLCVFA
INNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSR
TVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREI
RKHKE
Description


Functional site

1) chain F
residue 12
type
sequence G
description binding site for residue GNP F 201
source : AE1

2) chain F
residue 13
type
sequence G
description binding site for residue GNP F 201
source : AE1

3) chain F
residue 14
type
sequence V
description binding site for residue GNP F 201
source : AE1

4) chain F
residue 15
type
sequence G
description binding site for residue GNP F 201
source : AE1

5) chain F
residue 16
type
sequence K
description binding site for residue GNP F 201
source : AE1

6) chain F
residue 17
type
sequence S
description binding site for residue GNP F 201
source : AE1

7) chain F
residue 18
type
sequence A
description binding site for residue GNP F 201
source : AE1

8) chain F
residue 28
type
sequence F
description binding site for residue GNP F 201
source : AE1

9) chain F
residue 29
type
sequence V
description binding site for residue GNP F 201
source : AE1

10) chain F
residue 30
type
sequence D
description binding site for residue GNP F 201
source : AE1

11) chain F
residue 32
type
sequence Y
description binding site for residue GNP F 201
source : AE1

12) chain F
residue 34
type
sequence P
description binding site for residue GNP F 201
source : AE1

13) chain F
residue 35
type
sequence T
description binding site for residue GNP F 201
source : AE1

14) chain F
residue 60
type
sequence G
description binding site for residue GNP F 201
source : AE1

15) chain F
residue 116
type
sequence N
description binding site for residue GNP F 201
source : AE1

16) chain F
residue 117
type
sequence K
description binding site for residue GNP F 201
source : AE1

17) chain F
residue 119
type
sequence D
description binding site for residue GNP F 201
source : AE1

18) chain F
residue 120
type
sequence L
description binding site for residue GNP F 201
source : AE1

19) chain F
residue 145
type
sequence S
description binding site for residue GNP F 201
source : AE1

20) chain F
residue 146
type
sequence A
description binding site for residue GNP F 201
source : AE1

21) chain F
residue 147
type
sequence K
description binding site for residue GNP F 201
source : AE1

22) chain F
residue 7
type
sequence V
description binding site for residue 9R5 F 202
source : AE2

23) chain F
residue 39
type
sequence S
description binding site for residue 9R5 F 202
source : AE2

24) chain F
residue 54
type
sequence D
description binding site for residue 9R5 F 202
source : AE2

25) chain F
residue 74
type
sequence T
description binding site for residue 9R5 F 202
source : AE2

26) chain F
residue 75
type
sequence G
description binding site for residue 9R5 F 202
source : AE2

27) chain F
residue 68
type
sequence R
description binding site for residue 9R5 F 203
source : AE3

28) chain F
residue 88
type
sequence K
description binding site for residue 9R5 F 203
source : AE3

29) chain F
residue 92
type
sequence D
description binding site for residue 9R5 F 203
source : AE3

30) chain F
residue 95
type
sequence H
description binding site for residue 9R5 F 203
source : AE3

31) chain F
residue 96
type
sequence Y
description binding site for residue 9R5 F 203
source : AE3

32) chain F
residue 99
type
sequence Q
description binding site for residue 9R5 F 203
source : AE3

33) chain F
residue 124
type
sequence T
description binding site for residue DMS F 204
source : AE4

34) chain F
residue 126
type
sequence D
description binding site for residue DMS F 204
source : AE4

35) chain F
residue 129
type
sequence Q
description binding site for residue DMS F 204
source : AE4

36) chain F
residue 17
type
sequence S
description binding site for residue MG F 205
source : AE5

37) chain F
residue 35
type
sequence T
description binding site for residue MG F 205
source : AE5

38) chain F
residue 10
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
source Swiss-Prot : SWS_FT_FI1

39) chain F
residue 29
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
source Swiss-Prot : SWS_FT_FI1

40) chain F
residue 59
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
source Swiss-Prot : SWS_FT_FI1

41) chain F
residue 116
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
source Swiss-Prot : SWS_FT_FI1

42) chain F
residue 1
type MOD_RES
sequence M
description N-acetylmethionine; in GTPase KRas; alternate => ECO:0000269|Ref.17
source Swiss-Prot : SWS_FT_FI2

43) chain F
residue 2
type MOD_RES
sequence T
description N-acetylthreonine; in GTPase KRas, N-terminally processed => ECO:0000269|Ref.17
source Swiss-Prot : SWS_FT_FI3

44) chain F
residue 104
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:22711838
source Swiss-Prot : SWS_FT_FI4

45) chain F
residue 35
type CARBOHYD
sequence T
description (Microbial infection) O-linked (Glc) threonine; by P.sordellii toxin TcsL => ECO:0000269|PubMed:19744486
source Swiss-Prot : SWS_FT_FI5


Display surface

Download
Links