eF-site ID 5oct-B
PDB Code 5oct
Chain B

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Title Discovery of small molecules binding to KRAS via high affinity antibody fragment competition method.
Classification HYDROLASE
Compound GTPase KRas
Source (RASK_HUMAN)
Sequence B:  YFQGMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI
EDSYRKQVVIDGETXLLDILDTAGHSAMRDQYMRTGEGFL
CVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCD
LPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTL
VREIRKHKE
Description


Functional site

1) chain B
residue 22
type
sequence Q
description binding site for residue PEG A 203
source : AC3

2) chain B
residue 28
type
sequence F
description binding site for residue PEG A 203
source : AC3

3) chain B
residue 147
type
sequence K
description binding site for residue PEG A 203
source : AC3

4) chain B
residue 12
type
sequence G
description binding site for residue GNP B 201
source : AC5

5) chain B
residue 13
type
sequence G
description binding site for residue GNP B 201
source : AC5

6) chain B
residue 14
type
sequence V
description binding site for residue GNP B 201
source : AC5

7) chain B
residue 15
type
sequence G
description binding site for residue GNP B 201
source : AC5

8) chain B
residue 16
type
sequence K
description binding site for residue GNP B 201
source : AC5

9) chain B
residue 17
type
sequence S
description binding site for residue GNP B 201
source : AC5

10) chain B
residue 18
type
sequence A
description binding site for residue GNP B 201
source : AC5

11) chain B
residue 28
type
sequence F
description binding site for residue GNP B 201
source : AC5

12) chain B
residue 29
type
sequence V
description binding site for residue GNP B 201
source : AC5

13) chain B
residue 30
type
sequence D
description binding site for residue GNP B 201
source : AC5

14) chain B
residue 31
type
sequence E
description binding site for residue GNP B 201
source : AC5

15) chain B
residue 32
type
sequence Y
description binding site for residue GNP B 201
source : AC5

16) chain B
residue 34
type
sequence P
description binding site for residue GNP B 201
source : AC5

17) chain B
residue 35
type
sequence T
description binding site for residue GNP B 201
source : AC5

18) chain B
residue 60
type
sequence G
description binding site for residue GNP B 201
source : AC5

19) chain B
residue 116
type
sequence N
description binding site for residue GNP B 201
source : AC5

20) chain B
residue 117
type
sequence K
description binding site for residue GNP B 201
source : AC5

21) chain B
residue 119
type
sequence D
description binding site for residue GNP B 201
source : AC5

22) chain B
residue 120
type
sequence L
description binding site for residue GNP B 201
source : AC5

23) chain B
residue 145
type
sequence S
description binding site for residue GNP B 201
source : AC5

24) chain B
residue 146
type
sequence A
description binding site for residue GNP B 201
source : AC5

25) chain B
residue 5
type
sequence K
description binding site for residue 9R5 B 202
source : AC6

26) chain B
residue 39
type
sequence S
description binding site for residue 9R5 B 202
source : AC6

27) chain B
residue 54
type
sequence D
description binding site for residue 9R5 B 202
source : AC6

28) chain B
residue 56
type
sequence L
description binding site for residue 9R5 B 202
source : AC6

29) chain B
residue 74
type
sequence T
description binding site for residue 9R5 B 202
source : AC6

30) chain B
residue 75
type
sequence G
description binding site for residue 9R5 B 202
source : AC6

31) chain B
residue 17
type
sequence S
description binding site for residue MG B 203
source : AC7

32) chain B
residue 35
type
sequence T
description binding site for residue MG B 203
source : AC7

33) chain B
residue 10
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
source Swiss-Prot : SWS_FT_FI1

34) chain B
residue 29
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
source Swiss-Prot : SWS_FT_FI1

35) chain B
residue 59
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
source Swiss-Prot : SWS_FT_FI1

36) chain B
residue 116
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:22431598, ECO:0000269|PubMed:22566140
source Swiss-Prot : SWS_FT_FI1

37) chain B
residue 1
type MOD_RES
sequence M
description N-acetylmethionine; in GTPase KRas; alternate => ECO:0000269|Ref.17
source Swiss-Prot : SWS_FT_FI2

38) chain B
residue 2
type MOD_RES
sequence T
description N-acetylthreonine; in GTPase KRas, N-terminally processed => ECO:0000269|Ref.17
source Swiss-Prot : SWS_FT_FI3

39) chain B
residue 104
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:22711838
source Swiss-Prot : SWS_FT_FI4

40) chain B
residue 35
type CARBOHYD
sequence T
description (Microbial infection) O-linked (Glc) threonine; by P.sordellii toxin TcsL => ECO:0000269|PubMed:19744486
source Swiss-Prot : SWS_FT_FI5


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