eF-site ID 5o5o-B
PDB Code 5o5o
Chain B

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Title X-ray crystal structure of RapZ from Escherichia coli (P32 space group)
Classification CHAPERONE
Compound RNase adapter protein RapZ
Source Escherichia coli (strain K12) (RAPZ_ECOLI)
Sequence B:  MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDL
ARTLADREISAAVSIDVRNMPSPEIFEQAMSNLPDFSPQL
LFLDADRNTLIRRYAIDKESDLLEPLRSRADLIVDTSEMS
VHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV
FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIY
QTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQ
LADYFRSRGKNVQSRHRTLEK
Description (1)  RNase adapter protein RapZ


Functional site

1) chain B
residue 188
type
sequence N
description binding site for residue SO4 B 301
source : AC3

2) chain B
residue 190
type
sequence H
description binding site for residue SO4 B 301
source : AC3

3) chain B
residue 247
type
sequence C
description binding site for residue SO4 B 301
source : AC3

4) chain B
residue 248
type
sequence T
description binding site for residue SO4 B 301
source : AC3

5) chain B
residue 249
type
sequence G
description binding site for residue SO4 B 301
source : AC3

6) chain B
residue 253
type
sequence R
description binding site for residue SO4 B 301
source : AC3

7) chain B
residue 188
type
sequence N
description binding site for residue SO4 B 302
source : AC4

8) chain B
residue 253
type
sequence R
description binding site for residue SO4 B 302
source : AC4

9) chain B
residue 235
type
sequence T
description binding site for residue SO4 D 301
source : AC7

10) chain B
residue 220
type
sequence Y
description binding site for residue SO4 D 302
source : AC8

11) chain B
residue 223
type
sequence R
description binding site for residue SO4 D 302
source : AC8

12) chain B
residue 7
type
sequence S
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

13) chain B
residue 8
type
sequence G
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

14) chain B
residue 11
type
sequence G
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

15) chain B
residue 13
type
sequence G
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

16) chain B
residue 15
type
sequence S
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

17) chain B
residue 16
type
sequence V
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

18) chain B
residue 17
type
sequence A
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

19) chain B
residue 18
type
sequence L
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

20) chain B
residue 56
type
sequence D
description binding site for Di-peptide SO4 B 303 and LYS B 14
source : AD2

21) chain B
residue 8
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_00636
source Swiss-Prot : SWS_FT_FI1

22) chain B
residue 56
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00636
source Swiss-Prot : SWS_FT_FI1

23) chain B
residue 251
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:18723842
source Swiss-Prot : SWS_FT_FI2


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