|
eF-site ID
|
5no3-B |
PDB Code
|
5no3 |
Chain
|
B |
|
click to enlarge
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Title
|
RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3) |
Classification
|
RIBOSOME |
Compound
|
16S ribosomal RNA |
Source
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ORGANISM_SCIENTIFIC: Escherichia coli (strain K12); |
|
Sequence
|
B: |
VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINL
EKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDA
ALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD
GTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFV
IDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGN
DDAIRAVTLYLGAVAATVREGRSQ
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Description
|
(1) |
30S ribosomal protein S2, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, Small ribosomal subunit biogenesis GTPase RsgA/RNA Complex
|
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Functional site
|
|
1)
|
chain |
B |
residue |
18 |
type |
|
sequence |
H
|
description |
binding site for residue ZN B 301
|
source |
: AI6
|
|
2)
|
chain |
B |
residue |
165 |
type |
|
sequence |
D
|
description |
binding site for residue ZN B 301
|
source |
: AI6
|
|
3)
|
chain |
B |
residue |
190 |
type |
|
sequence |
N
|
description |
binding site for residue ZN B 301
|
source |
: AI6
|
|
4)
|
chain |
B |
residue |
204 |
type |
|
sequence |
D
|
description |
binding site for residue ZN B 301
|
source |
: AI6
|
|
5)
|
chain |
B |
residue |
6-17 |
type |
prosite |
sequence |
MRDMLKAGVHFG
|
description |
RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDMLKAGVHFG
|
source |
prosite : PS00962
|
|
6)
|
chain |
B |
residue |
158-182 |
type |
prosite |
sequence |
PDALFVIDADHEHIAIKEANNLGIP
|
description |
RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDadhEhiaIkEannlGIP
|
source |
prosite : PS00963
|
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