eF-site ID 5nmd-B PDB Code 5nmd Chain B click to enlarge Title 868 TCR Specific for HLA A02 presenting HIV Epitope SLYNTVATL Classification IMMUNE SYSTEM Compound human T-cell Receptor alpha chain Source (5NMD) Sequence B:  DAGVTQSPTHLIKTRGQQVTLRCSPKQGHDTVSWYQQALG QGPQFIFQYYEEEERQRGNFPDRFSGHQFPNYSSELNVNA LLLGDSALYLCASSDTVSYEQYFGPGTRLTVTEDLKNVFP PEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQ DPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGR AD Description Functional site 1) chain B residue 149 type sequence Y description binding site for residue EDO B 301 source : AC3 2) chain B residue 150 type sequence P description binding site for residue EDO B 301 source : AC3 3) chain B residue 151 type sequence D description binding site for residue EDO B 301 source : AC3 4) chain B residue 186 type sequence Y description binding site for residue EDO B 301 source : AC3 5) chain B residue 11 type sequence L description binding site for residue EDO B 302 source : AC4 6) chain B residue 12 type sequence I description binding site for residue EDO B 302 source : AC4 7) chain B residue 214 type sequence G description binding site for residue EDO B 302 source : AC4 8) chain B residue 216 type sequence S description binding site for residue EDO B 302 source : AC4 9) chain B residue 219 type sequence D description binding site for residue EDO B 302 source : AC4 10) chain B residue 15 type sequence R description binding site for residue SO4 B 303 source : AC5 11) chain B residue 16 type sequence G description binding site for residue SO4 B 303 source : AC5 12) chain B residue 80 type sequence A description binding site for residue SO4 B 303 source : AC5 13) chain B residue 81 type sequence L description binding site for residue SO4 B 303 source : AC5 14) chain B residue 82 type sequence L description binding site for residue SO4 B 303 source : AC5 15) chain B residue 161 type sequence G description binding site for residue SO4 D 301 source : AC8 16) chain B residue 205 type sequence H description binding site for residue SO4 D 301 source : AC8 17) chain B residue 207 type sequence R description binding site for residue SO4 D 301 source : AC8

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