eF-site ID 5n6l-B
PDB Code 5n6l
Chain B

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Title Structure of the membrane integral lipoprotein N-acyltransferase Lnt C387A mutant from E. coli
Classification TRANSFERASE
Compound Apolipoprotein N-acyltransferase
Source (LNT_ECOLI)
Sequence B:  FASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLM
GLQALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATF
GGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTWL
RVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPLKG
LAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLF
ALPFPLRYIQWFTPQPEKTIQVSMVQGDIPQSLKWDEGQL
LNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLK
ALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKG
APYSYESADRYNKNHLVPFGEFVPLESFSRGPYIQPPLSA
NGIELTAAIAYEIILGEQVRDNFRPDTDYLLTISNDAWFG
KSIGPWQHFQMARMRALELARPLLRSTNNGITAVIGPQGE
IQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTAL
FGFAAVLMSLR
Description


Functional site

1) chain B
residue 211
type
sequence I
description binding site for residue OLC A 619
source : AE1

2) chain B
residue 212
type
sequence Q
description binding site for residue OLC A 619
source : AE1

3) chain B
residue 22
type
sequence A
description binding site for residue OLC B 601
source : AF1

4) chain B
residue 26
type
sequence L
description binding site for residue OLC B 601
source : AF1

5) chain B
residue 31
type
sequence Y
description binding site for residue OLC B 601
source : AF1

6) chain B
residue 70
type
sequence S
description binding site for residue OLC B 601
source : AF1

7) chain B
residue 73
type
sequence N
description binding site for residue OLC B 601
source : AF1

8) chain B
residue 178
type
sequence M
description binding site for residue OLC B 602
source : AF2

9) chain B
residue 494
type
sequence L
description binding site for residue OLC B 602
source : AF2

10) chain B
residue 498
type
sequence F
description binding site for residue OLC B 602
source : AF2

11) chain B
residue 7
type
sequence I
description binding site for residue OLC B 603
source : AF3

12) chain B
residue 13
type
sequence R
description binding site for residue OLC B 603
source : AF3

13) chain B
residue 46
type
sequence A
description binding site for residue OLC B 603
source : AF3

14) chain B
residue 47
type
sequence L
description binding site for residue OLC B 603
source : AF3

15) chain B
residue 49
type
sequence F
description binding site for residue OLC B 603
source : AF3

16) chain B
residue 134
type
sequence V
description binding site for residue OLC B 604
source : AF4

17) chain B
residue 394
type
sequence E
description binding site for residue OLC B 604
source : AF4

18) chain B
residue 488
type
sequence N
description binding site for residue OLC B 604
source : AF4

19) chain B
residue 489
type
sequence W
description binding site for residue OLC B 604
source : AF4

20) chain B
residue 492
type
sequence W
description binding site for residue OLC B 604
source : AF4

21) chain B
residue 499
type
sequence G
description binding site for residue OLC B 604
source : AF4

22) chain B
residue 54
type
sequence L
description binding site for residue OLC B 605
source : AF5

23) chain B
residue 96
type
sequence L
description binding site for residue OLC B 605
source : AF5

24) chain B
residue 103
type
sequence L
description binding site for residue OLC B 605
source : AF5

25) chain B
residue 210
type
sequence Y
description binding site for residue OLC B 606
source : AF6

26) chain B
residue 211
type
sequence I
description binding site for residue OLC B 606
source : AF6

27) chain B
residue 212
type
sequence Q
description binding site for residue OLC B 606
source : AF6

28) chain B
residue 209
type
sequence R
description binding site for residue OLC B 607
source : AF7

29) chain B
residue 137
type
sequence F
description binding site for residue OLC B 608
source : AF8

30) chain B
residue 141
type
sequence W
description binding site for residue OLC B 608
source : AF8

31) chain B
residue 488
type
sequence N
description binding site for residue OLC B 608
source : AF8

32) chain B
residue 492
type
sequence W
description binding site for residue OLC B 608
source : AF8

33) chain B
residue 141
type
sequence W
description binding site for residue GOL B 609
source : AF9

34) chain B
residue 143
type
sequence L
description binding site for residue GOL B 609
source : AF9

35) chain B
residue 144
type
sequence T
description binding site for residue GOL B 609
source : AF9

36) chain B
residue 277
type
sequence Q
description binding site for residue GOL B 610
source : AG1

37) chain B
residue 280
type
sequence F
description binding site for residue GOL B 610
source : AG1

38) chain B
residue 32
type
sequence D
description binding site for residue GOL B 611
source : AG2

39) chain B
residue 244
type
sequence N
description binding site for residue GOL B 612
source : AG3

40) chain B
residue 387
type ACT_SITE
sequence A
description Nucleophile => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
source Swiss-Prot : SWS_FT_FI6

41) chain B
residue 49-52
type TOPO_DOM
sequence FNRR
description Cytoplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI1

42) chain B
residue 117-120
type TOPO_DOM
sequence PKTT
description Cytoplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI1

43) chain B
residue 190-191
type TOPO_DOM
sequence RN
description Cytoplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI1

44) chain B
residue 34-48
type TRANSMEM
sequence WPAAIISLMGLQALT
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

45) chain B
residue 53-68
type TRANSMEM
sequence PLQSAAIGFCWGFGLF
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

46) chain B
residue 87-116
type TRANSMEM
sequence GPVNIFLVVLLAAYLSLYTGLFAGVLSRLW
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

47) chain B
residue 121-141
type TRANSMEM
sequence WLRVAIAAPALWQVTEFLRGW
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

48) chain B
residue 169-189
type TRANSMEM
sequence VEAINFLLMMVSGLLALALVK
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

49) chain B
residue 192-210
type TRANSMEM
sequence WRPLVVAVVLFALPFPLRY
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

50) chain B
residue 488-508
type TRANSMEM
sequence NWPLWVLTALFGFAAVLMSLR
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

51) chain B
residue 10-27
type TRANSMEM
sequence QRIRLLLALLFGACGTLA
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

52) chain B
residue 28-33
type TOPO_DOM
sequence FSPYDV
description Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI3

53) chain B
residue 69-86
type TOPO_DOM
sequence GSGINWVYVSIATFGGMP
description Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI3

54) chain B
residue 142-168
type TOPO_DOM
sequence VLTGFPWLQFGYSQIDGPLKGLAPIMG
description Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI3

55) chain B
residue 211-487
type TOPO_DOM
sequence IQWFTPQPEKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYY
NATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRD
KGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESA
DRYNKNHLVPFGEFVPLESFSRGPYIQPPLSANGIELTAA
IAYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQH
FQMARMRALELARPLLRSTNNGITAVIGPQGEIQAMIPQF
TREVLTTNVTPTTGLTPYARTG
description Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI3

56) chain B
residue 267
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
source Swiss-Prot : SWS_FT_FI4

57) chain B
residue 335
type ACT_SITE
sequence K
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
source Swiss-Prot : SWS_FT_FI5


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