eF-site ID 5n6h-A
PDB Code 5n6h
Chain A

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Title Structure of the membrane integral lipoprotein N-acyltransferase Lnt from E. coli
Classification MEMBRANE PROTEIN
Compound Apolipoprotein N-acyltransferase
Source (LNT_ECOLI)
Sequence A:  LIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQ
ALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGM
PGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTWLRVA
IAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPLKGLAP
IMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALP
FPLRYIQWFTPQPEKTIQVSMVQGDIPQSLKWDEGQLLNT
LKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALD
GELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPY
SYESADRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSF
SRGPYIQPPLSANGIELTAAICYEIILGEQVRDNFRPDTD
YLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTN
NGITAVIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYAR
TGNWPLWVLTALFGFAAVLMSLR
Description (1)  Apolipoprotein N-acyltransferase (E.C.2.3.1.-)


Functional site

1) chain A
residue 22
type
sequence A
description binding site for residue OLC A 601
source : AC1

2) chain A
residue 25
type
sequence T
description binding site for residue OLC A 601
source : AC1

3) chain A
residue 26
type
sequence L
description binding site for residue OLC A 601
source : AC1

4) chain A
residue 31
type
sequence Y
description binding site for residue OLC A 601
source : AC1

5) chain A
residue 70
type
sequence S
description binding site for residue OLC A 601
source : AC1

6) chain A
residue 73
type
sequence N
description binding site for residue OLC A 601
source : AC1

7) chain A
residue 13
type
sequence R
description binding site for residue OLC A 602
source : AC2

8) chain A
residue 46
type
sequence A
description binding site for residue OLC A 602
source : AC2

9) chain A
residue 47
type
sequence L
description binding site for residue OLC A 602
source : AC2

10) chain A
residue 49
type
sequence F
description binding site for residue OLC A 602
source : AC2

11) chain A
residue 50
type
sequence N
description binding site for residue OLC A 602
source : AC2

12) chain A
residue 188
type
sequence V
description binding site for residue OLC A 602
source : AC2

13) chain A
residue 121
type
sequence W
description binding site for residue OLC A 603
source : AC3

14) chain A
residue 171
type
sequence A
description binding site for residue OLC A 603
source : AC3

15) chain A
residue 178
type
sequence M
description binding site for residue OLC A 603
source : AC3

16) chain A
residue 191
type
sequence N
description binding site for residue OLC A 603
source : AC3

17) chain A
residue 197
type
sequence V
description binding site for residue OLC A 603
source : AC3

18) chain A
residue 10
type
sequence Q
description binding site for residue OLC A 604
source : AC4

19) chain A
residue 52
type
sequence R
description binding site for residue OLC A 604
source : AC4

20) chain A
residue 55
type
sequence Q
description binding site for residue OLC A 604
source : AC4

21) chain A
residue 58
type
sequence A
description binding site for residue OLC A 604
source : AC4

22) chain A
residue 61
type
sequence F
description binding site for residue OLC A 604
source : AC4

23) chain A
residue 131
type
sequence L
description binding site for residue OLC A 605
source : AC5

24) chain A
residue 134
type
sequence V
description binding site for residue OLC A 605
source : AC5

25) chain A
residue 488
type
sequence N
description binding site for residue OLC A 605
source : AC5

26) chain A
residue 489
type
sequence W
description binding site for residue OLC A 605
source : AC5

27) chain A
residue 492
type
sequence W
description binding site for residue OLC A 605
source : AC5

28) chain A
residue 499
type
sequence G
description binding site for residue OLC A 605
source : AC5

29) chain A
residue 52
type
sequence R
description binding site for residue OLC A 606
source : AC6

30) chain A
residue 54
type
sequence L
description binding site for residue OLC A 606
source : AC6

31) chain A
residue 107
type
sequence L
description binding site for residue OLC A 606
source : AC6

32) chain A
residue 114
type
sequence R
description binding site for residue OLC A 606
source : AC6

33) chain A
residue 18
type
sequence L
description binding site for residue OLC A 607
source : AC7

34) chain A
residue 62
type
sequence C
description binding site for residue OLC A 607
source : AC7

35) chain A
residue 134
type
sequence V
description binding site for residue OLC A 608
source : AC8

36) chain A
residue 137
type
sequence F
description binding site for residue OLC A 608
source : AC8

37) chain A
residue 170
type
sequence E
description binding site for residue OLC A 608
source : AC8

38) chain A
residue 488
type
sequence N
description binding site for residue OLC A 608
source : AC8

39) chain A
residue 492
type
sequence W
description binding site for residue OLC A 608
source : AC8

40) chain A
residue 485
type
sequence R
description binding site for residue OLC A 609
source : AC9

41) chain A
residue 341
type
sequence F
description binding site for residue OLC A 610
source : AD1

42) chain A
residue 22
type
sequence A
description binding site for residue OLC A 611
source : AD2

43) chain A
residue 69
type
sequence G
description binding site for residue OLC A 611
source : AD2

44) chain A
residue 73
type
sequence N
description binding site for residue OLC A 611
source : AD2

45) chain A
residue 76
type
sequence Y
description binding site for residue OLC A 611
source : AD2

46) chain A
residue 94
type
sequence V
description binding site for residue OLC A 611
source : AD2

47) chain A
residue 95
type
sequence V
description binding site for residue OLC A 611
source : AD2

48) chain A
residue 190
type
sequence R
description binding site for residue OLC A 612
source : AD3

49) chain A
residue 192
type
sequence W
description binding site for residue OLC A 612
source : AD3

50) chain A
residue 143
type
sequence L
description binding site for residue GOL A 613
source : AD4

51) chain A
residue 141
type
sequence W
description binding site for residue GOL A 614
source : AD5

52) chain A
residue 203
type
sequence A
description binding site for residue GOL A 615
source : AD6

53) chain A
residue 206
type
sequence F
description binding site for residue GOL A 615
source : AD6

54) chain A
residue 239
type
sequence E
description binding site for residue GOL A 616
source : AD7

55) chain A
residue 243
type
sequence L
description binding site for residue GOL A 616
source : AD7

56) chain A
residue 277
type
sequence Q
description binding site for residue GOL A 616
source : AD7

57) chain A
residue 279
type
sequence P
description binding site for residue GOL A 616
source : AD7

58) chain A
residue 280
type
sequence F
description binding site for residue GOL A 616
source : AD7

59) chain A
residue 10
type
sequence Q
description binding site for residue GOL A 617
source : AD8

60) chain A
residue 11
type
sequence R
description binding site for residue GOL A 617
source : AD8

61) chain A
residue 258
type
sequence G
description binding site for residue GOL A 618
source : AD9

62) chain A
residue 259
type
sequence K
description binding site for residue GOL A 618
source : AD9

63) chain A
residue 261
type
sequence S
description binding site for residue GOL A 618
source : AD9

64) chain A
residue 291
type
sequence K
description binding site for residue GOL A 618
source : AD9

65) chain A
residue 292
type
sequence G
description binding site for residue GOL A 618
source : AD9

66) chain A
residue 293
type
sequence S
description binding site for residue GOL A 618
source : AD9

67) chain A
residue 86
type
sequence P
description binding site for residue OLC B 602
source : AE2

68) chain A
residue 88
type
sequence P
description binding site for residue OLC B 602
source : AE2

69) chain A
residue 89
type
sequence V
description binding site for residue OLC B 602
source : AE2

70) chain A
residue 54
type
sequence L
description binding site for residue OLC B 605
source : AE5

71) chain A
residue 49-52
type TOPO_DOM
sequence FNRR
description Cytoplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI1

72) chain A
residue 117-120
type TOPO_DOM
sequence PKTT
description Cytoplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI1

73) chain A
residue 190-191
type TOPO_DOM
sequence RN
description Cytoplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI1

74) chain A
residue 10-27
type TRANSMEM
sequence QRIRLLLALLFGACGTLA
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

75) chain A
residue 34-48
type TRANSMEM
sequence WPAAIISLMGLQALT
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

76) chain A
residue 53-68
type TRANSMEM
sequence PLQSAAIGFCWGFGLF
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

77) chain A
residue 87-116
type TRANSMEM
sequence GPVNIFLVVLLAAYLSLYTGLFAGVLSRLW
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

78) chain A
residue 121-141
type TRANSMEM
sequence WLRVAIAAPALWQVTEFLRGW
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

79) chain A
residue 169-189
type TRANSMEM
sequence VEAINFLLMMVSGLLALALVK
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

80) chain A
residue 192-210
type TRANSMEM
sequence WRPLVVAVVLFALPFPLRY
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

81) chain A
residue 488-508
type TRANSMEM
sequence NWPLWVLTALFGFAAVLMSLR
description Helical => ECO:0000269|PubMed:28675161
source Swiss-Prot : SWS_FT_FI2

82) chain A
residue 28-33
type TOPO_DOM
sequence FSPYDV
description Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI3

83) chain A
residue 69-86
type TOPO_DOM
sequence GSGINWVYVSIATFGGMP
description Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI3

84) chain A
residue 142-168
type TOPO_DOM
sequence VLTGFPWLQFGYSQIDGPLKGLAPIMG
description Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI3

85) chain A
residue 211-487
type TOPO_DOM
sequence IQWFTPQPEKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYY
NATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRD
KGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESA
DRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPY
IQPPLSANGIELTAAICYEIILGEQVRDNFRPDTDYLLTI
SNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA
VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTG
description Periplasmic => ECO:0000269|PubMed:28675161, ECO:0000269|PubMed:28885614
source Swiss-Prot : SWS_FT_FI3

86) chain A
residue 267
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
source Swiss-Prot : SWS_FT_FI4

87) chain A
residue 335
type ACT_SITE
sequence K
description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
source Swiss-Prot : SWS_FT_FI5

88) chain A
residue 387
type ACT_SITE
sequence C
description Nucleophile => ECO:0000255|HAMAP-Rule:MF_01148, ECO:0000305|PubMed:28675161
source Swiss-Prot : SWS_FT_FI6


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