eF-site ID 5mrr-D
PDB Code 5mrr
Chain D

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Title Crystal structure of L1 protease of Lysobacter sp. XL1
Classification HYDROLASE
Compound Lytic endopeptidase preproenzyme
Source Lysobacter sp. (strain XL1) (D2K8B3_LYSSX)
Sequence D:  VNVLGGIEYSINNATLCSVGFSVTRGATKGFVTAGHCGGV
GAIVRIGGTQVGSFAARVFPGNDRAWVSVGSAHTLQGAVS
NYSGGTIAIRGSAEAAIGAAVCRSGRTTGYRCGNITAKNV
TANYAEGAVRGLTQGNACMGRGDSGGSWFTSAGQAQGVMS
GGNVQSNGNNCGIPASQRSSLFERVGPILSQYGLSLVTS
Description


Functional site

1) chain D
residue 83
type
sequence S
description binding site for residue GOL A 206
source : AC6

2) chain D
residue 110
type
sequence Y
description binding site for residue GOL A 206
source : AC6

3) chain D
residue 13
type
sequence N
description binding site for residue GOL C 206
source : AE2

4) chain D
residue 111
type
sequence R
description binding site for residue SO4 D 201
source : AE4

5) chain D
residue 178
type
sequence R
description binding site for residue SO4 D 201
source : AE4

6) chain D
residue 82
type
sequence Y
description binding site for residue CL D 202
source : AE5

7) chain D
residue 109
type
sequence G
description binding site for residue CL D 202
source : AE5

8) chain D
residue 110
type
sequence Y
description binding site for residue CL D 202
source : AE5

9) chain D
residue 39
type
sequence G
description binding site for residue CL D 203
source : AE6

10) chain D
residue 40
type
sequence V
description binding site for residue CL D 203
source : AE6

11) chain D
residue 57
type
sequence R
description binding site for residue CL D 203
source : AE6

12) chain D
residue 81
type
sequence N
description binding site for residue NA D 204
source : AE7

13) chain D
residue 82
type
sequence Y
description binding site for residue NA D 204
source : AE7

14) chain D
residue 83
type
sequence S
description binding site for residue NA D 204
source : AE7

15) chain D
residue 124
type
sequence Y
description binding site for residue GOL D 205
source : AE8

16) chain D
residue 126
type
sequence E
description binding site for residue GOL D 205
source : AE8

17) chain D
residue 160
type
sequence S
description binding site for residue GOL D 205
source : AE8

18) chain D
residue 161
type
sequence G
description binding site for residue GOL D 205
source : AE8


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