eF-site ID 5mrr-ABCD PDB Code 5mrr Chain A, B, C, D click to enlarge Title Crystal structure of L1 protease of Lysobacter sp. XL1 Classification HYDROLASE Compound Lytic endopeptidase preproenzyme Source Lysobacter sp. (strain XL1) (D2K8B3_LYSSX) Sequence A:  VNVLGGIEYSINNATLCSVGFSVTRGATKGFVTAGHCGGV GAIVRIGGTQVGSFAARVFPGNDRAWVSVGSAHTLQGAVS NYSGGTIAIRGSAEAAIGAAVCRSGRTTGYRCGNITAKNV TANYAEGAVRGLTQGNACMGRGDSGGSWFTSAGQAQGVMS GGNVQSNGNNCGIPASQRSSLFERVGPILSQYGLSLVTS B:  VNVLGGIEYSINNATLCSVGFSVTRGATKGFVTAGHCGGV GAIVRIGGTQVGSFAARVFPGNDRAWVSVGSAHTLQGAVS NYSGGTIAIRGSAEAAIGAAVCRSGRTTGYRCGNITAKNV TANYAEGAVRGLTQGNACMGRGDSGGSWFTSAGQAQGVMS GGNVQSNGNNCGIPASQRSSLFERVGPILSQYGLSLVTS C:  VNVLGGIEYSINNATLCSVGFSVTRGATKGFVTAGHCGGV GAIVRIGGTQVGSFAARVFPGNDRAWVSVGSAHTLQGAVS NYSGGTIAIRGSAEAAIGAAVCRSGRTTGYRCGNITAKNV TANYAEGAVRGLTQGNACMGRGDSGGSWFTSAGQAQGVMS GGNVQSNGNNCGIPASQRSSLFERVGPILSQYGLSLVTS D:  VNVLGGIEYSINNATLCSVGFSVTRGATKGFVTAGHCGGV GAIVRIGGTQVGSFAARVFPGNDRAWVSVGSAHTLQGAVS NYSGGTIAIRGSAEAAIGAAVCRSGRTTGYRCGNITAKNV TANYAEGAVRGLTQGNACMGRGDSGGSWFTSAGQAQGVMS GGNVQSNGNNCGIPASQRSSLFERVGPILSQYGLSLVTS Description Functional site 1) chain A residue 25 type sequence R description binding site for residue SO4 A 201 source : AC1 2) chain A residue 26 type sequence G description binding site for residue SO4 A 201 source : AC1 3) chain A residue 27 type sequence A description binding site for residue SO4 A 201 source : AC1 4) chain A residue 28 type sequence T description binding site for residue SO4 A 201 source : AC1 5) chain A residue 96 type sequence A description binding site for residue CL A 202 source : AC2 6) chain A residue 97 type sequence I description binding site for residue CL A 202 source : AC2 7) chain A residue 118 type sequence K description binding site for residue CL A 202 source : AC2 8) chain A residue 184 type sequence R description binding site for residue CL A 203 source : AC3 9) chain A residue 185 type sequence V description binding site for residue CL A 203 source : AC3 10) chain A residue 186 type sequence G description binding site for residue CL A 203 source : AC3 11) chain A residue 29 type sequence K description binding site for residue CL A 204 source : AC4 12) chain A residue 74 type sequence T description binding site for residue CL A 204 source : AC4 13) chain A residue 75 type sequence L description binding site for residue CL A 204 source : AC4 14) chain A residue 125 type sequence A description binding site for residue CL A 205 source : AC5 15) chain A residue 167 type sequence N description binding site for residue GOL A 206 source : AC6 16) chain D residue 83 type sequence S description binding site for residue GOL A 206 source : AC6 17) chain D residue 110 type sequence Y description binding site for residue GOL A 206 source : AC6 18) chain B residue 12 type sequence N description binding site for residue SO4 B 201 source : AC7 19) chain B residue 45 type sequence R description binding site for residue SO4 B 201 source : AC7 20) chain C residue 191 type sequence Q description binding site for residue SO4 B 201 source : AC7 21) chain C residue 192 type sequence Y description binding site for residue SO4 B 201 source : AC7 22) chain B residue 45 type sequence R description binding site for residue SO4 B 202 source : AC8 23) chain B residue 48 type sequence G description binding site for residue SO4 B 202 source : AC8 24) chain B residue 50 type sequence Q description binding site for residue SO4 B 202 source : AC8 25) chain B residue 96 type sequence A description binding site for residue CL B 203 source : AC9 26) chain B residue 97 type sequence I description binding site for residue CL B 203 source : AC9 27) chain B residue 118 type sequence K description binding site for residue CL B 203 source : AC9 28) chain B residue 12 type sequence N description binding site for residue CL B 204 source : AD1 29) chain C residue 57 type sequence R description binding site for residue CL B 204 source : AD1 30) chain B residue 71 type sequence S description binding site for residue CL B 205 source : AD2 31) chain B residue 126 type sequence E description binding site for residue GOL B 206 source : AD3 32) chain B residue 160 type sequence S description binding site for residue GOL B 206 source : AD3 33) chain B residue 161 type sequence G description binding site for residue GOL B 206 source : AD3 34) chain B residue 57 type sequence R description binding site for residue GOL B 207 source : AD4 35) chain B residue 58 type sequence V description binding site for residue GOL B 207 source : AD4 36) chain B residue 59 type sequence F description binding site for residue GOL B 207 source : AD4 37) chain C residue 43 type sequence I description binding site for residue GOL B 207 source : AD4 38) chain C residue 50 type sequence Q description binding site for residue GOL B 207 source : AD4 39) chain B residue 62 type sequence N description binding site for residue TRS B 208 source : AD5 40) chain B residue 64 type sequence R description binding site for residue TRS B 208 source : AD5 41) chain B residue 187 type sequence P description binding site for residue TRS B 208 source : AD5 42) chain B residue 111 type sequence R description binding site for residue SO4 C 201 source : AD6 43) chain B residue 178 type sequence R description binding site for residue SO4 C 201 source : AD6 44) chain C residue 111 type sequence R description binding site for residue SO4 C 201 source : AD6 45) chain C residue 178 type sequence R description binding site for residue SO4 C 201 source : AD6 46) chain C residue 45 type sequence R description binding site for residue SO4 C 202 source : AD7 47) chain C residue 50 type sequence Q description binding site for residue SO4 C 202 source : AD7 48) chain C residue 95 type sequence A description binding site for residue CL C 203 source : AD8 49) chain C residue 96 type sequence A description binding site for residue CL C 203 source : AD8 50) chain C residue 125 type sequence A description binding site for residue CL C 204 source : AD9 51) chain A residue 39 type sequence G description binding site for residue GOL C 205 source : AE1 52) chain A residue 40 type sequence V description binding site for residue GOL C 205 source : AE1 53) chain A residue 57 type sequence R description binding site for residue GOL C 205 source : AE1 54) chain B residue 167 type sequence N description binding site for residue GOL C 205 source : AE1 55) chain C residue 81 type sequence N description binding site for residue GOL C 205 source : AE1 56) chain C residue 83 type sequence S description binding site for residue GOL C 205 source : AE1 57) chain C residue 108 type sequence T description binding site for residue GOL C 206 source : AE2 58) chain C residue 111 type sequence R description binding site for residue GOL C 206 source : AE2 59) chain D residue 13 type sequence N description binding site for residue GOL C 206 source : AE2 60) chain C residue 36 type sequence H description binding site for residue GOL C 207 source : AE3 61) chain C residue 59 type sequence F description binding site for residue GOL C 207 source : AE3 62) chain C residue 124 type sequence Y description binding site for residue GOL C 207 source : AE3 63) chain C residue 126 type sequence E description binding site for residue GOL C 207 source : AE3 64) chain C residue 160 type sequence S description binding site for residue GOL C 207 source : AE3 65) chain C residue 161 type sequence G description binding site for residue GOL C 207 source : AE3 66) chain A residue 111 type sequence R description binding site for residue SO4 D 201 source : AE4 67) chain A residue 138 type sequence C description binding site for residue SO4 D 201 source : AE4 68) chain A residue 178 type sequence R description binding site for residue SO4 D 201 source : AE4 69) chain D residue 111 type sequence R description binding site for residue SO4 D 201 source : AE4 70) chain D residue 178 type sequence R description binding site for residue SO4 D 201 source : AE4 71) chain D residue 82 type sequence Y description binding site for residue CL D 202 source : AE5 72) chain D residue 109 type sequence G description binding site for residue CL D 202 source : AE5 73) chain D residue 110 type sequence Y description binding site for residue CL D 202 source : AE5 74) chain D residue 39 type sequence G description binding site for residue CL D 203 source : AE6 75) chain D residue 40 type sequence V description binding site for residue CL D 203 source : AE6 76) chain D residue 57 type sequence R description binding site for residue CL D 203 source : AE6 77) chain D residue 81 type sequence N description binding site for residue NA D 204 source : AE7 78) chain D residue 82 type sequence Y description binding site for residue NA D 204 source : AE7 79) chain D residue 83 type sequence S description binding site for residue NA D 204 source : AE7 80) chain B residue 84 type sequence G description binding site for residue GOL D 205 source : AE8 81) chain D residue 124 type sequence Y description binding site for residue GOL D 205 source : AE8 82) chain D residue 126 type sequence E description binding site for residue GOL D 205 source : AE8 83) chain D residue 160 type sequence S description binding site for residue GOL D 205 source : AE8 84) chain D residue 161 type sequence G description binding site for residue GOL D 205 source : AE8 85) chain A residue 32-37 type prosite sequence VTAGHC description TRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VTAGHC source prosite : PS00134 86) chain A residue 138-149 type prosite sequence CMGRGDSGGSWF description TRYPSIN_SER Serine proteases, trypsin family, serine active site. CMgrGDSGGSWF source prosite : PS00135

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