eF-site ID 5mpb-L
PDB Code 5mpb
Chain L

click to enlarge
Title 26S proteasome in presence of AMP-PNP (s3)
Classification HYDROLASE
Compound Proteasome subunit alpha type-1
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c);
Sequence L:  EQEAHNKALNQFKRKLLEHRRYDDQLKQRRQNIRDLEKLY
DKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYI
VGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVY
NMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQ
RVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPA
SGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGG
RRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATN
RPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKV
KKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRD
HINPDDLMKAVRKVAEVKKLEGTIEYQK
Description (1)  Proteasome subunit alpha type-1 (E.C.3.4.25.1), Proteasome subunit alpha type-2 (E.C.3.4.25.1), Proteasome subunit alpha type-3 (E.C.3.4.25.1), Proteasome subunit alpha type-4 (E.C.3.4.25.1), Proteasome subunit alpha type-5 (E.C.3.4.25.1), Proteasome subunit alpha type-6 (E.C.3.4.25.1), Probable proteasome subunit alpha type-7 (E.C.3.4.25.1), Proteasome subunit beta type-1 (E.C.3.4.25.1), Proteasome subunit beta type-2 (E.C.3.4.25.1), Proteasome subunit beta type-3 (E.C.3.4.25.1), Proteasome subunit beta type-4 (E.C.3.4.25.1), Proteasome subunit beta type-5 (E.C.3.4.25.1), Proteasome subunit beta type-6 (E.C.3.4.25.1), Proteasome subunit beta type-7 (E.C.3.4.25.1), 26S protease regulatory subunit 7 homolog, 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6B homolog, 26S protease subunit RPT4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 8 homolog, 26S proteasome regulatory subunit RPN10, Ubiquitin carboxyl-terminal hydrolase RPN11 (E.C.3.4.19.12), 26S proteasome regulatory subunit RPN12, 26S proteasome regulatory subunit RPN13, 26S proteasome complex subunit SEM1, 26S proteasome regulatory subunit RPN1, 26S proteasome regulatory subunit RPN2, 26S proteasome regulatory subunit RPN3, 26S proteasome regulatory subunit RPN5, 26S proteasome regulatory subunit RPN6, 26S proteasome regulatory subunit RPN7, 26S proteasome regulatory subunit RPN8, 26S proteasome regulatory subunit RPN9


Functional site

1) chain L
residue 313
type
sequence D
description binding site for residue ANP K 501
source : AC5

2) chain L
residue 339
type
sequence R
description binding site for residue ANP K 501
source : AC5

3) chain L
residue 341
type
sequence G
description binding site for residue ANP K 501
source : AC5

4) chain L
residue 183
type
sequence I
description binding site for residue ANP L 501
source : AC7

5) chain L
residue 184
type
sequence G
description binding site for residue ANP L 501
source : AC7

6) chain L
residue 224
type
sequence P
description binding site for residue ANP L 501
source : AC7

7) chain L
residue 225
type
sequence G
description binding site for residue ANP L 501
source : AC7

8) chain L
residue 226
type
sequence T
description binding site for residue ANP L 501
source : AC7

9) chain L
residue 227
type
sequence G
description binding site for residue ANP L 501
source : AC7

10) chain L
residue 228
type
sequence K
description binding site for residue ANP L 501
source : AC7

11) chain L
residue 229
type
sequence T
description binding site for residue ANP L 501
source : AC7

12) chain L
residue 388
type
sequence G
description binding site for residue ANP L 501
source : AC7

13) chain L
residue 229
type
sequence T
description binding site for residue MG L 502
source : AC8

14) chain L
residue 321-339
type prosite
sequence TKIIMATNRPDTLDPALLR
description AAA AAA-protein family signature. IkIImATNrldiLDpALl.R
source prosite : PS00674


Display surface

Download
Links