eF-site ID 5mnj-ABCDEFGH
PDB Code 5mnj
Chain A, B, C, D, E, F, G, H

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Title Structure of MDM2-MDMX-UbcH5B-ubiquitin complex
Classification LIGASE
Compound Ubiquitin-conjugating enzyme E2 D2
Source (MDM4_HUMAN)
Sequence A:  ALKRIHKELNDLARDPPAQCRAGPVGDDMFHWQATIMGPN
DSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN
GSIKLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP
EIARIYKTDREKYNRIAREWTQKYAM
B:  QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
C:  SLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKL
KKRNKPCPVCRQPIQMIVLTYFP
D:  EDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRL
KKAGASCPICKKEIQLVIKVFIA
E:  ALKRIHKELNDLARDPPAQCRAGPVGDDMFHWQATIMGPN
DSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN
GSIKLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP
EIARIYKTDREKYNRIAREWTQKYAM
F:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
G:  SSSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAK
KLKKRNKPCPVCRQPIQMIVLTYFP
H:  MEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARR
LKKAGASCPICKKEIQLVIKVFIA
Description


Functional site

1) chain C
residue 438
type
sequence C
description binding site for residue ZN C 501
source : AC1

2) chain C
residue 441
type
sequence C
description binding site for residue ZN C 501
source : AC1

3) chain C
residue 461
type
sequence C
description binding site for residue ZN C 501
source : AC1

4) chain C
residue 464
type
sequence C
description binding site for residue ZN C 501
source : AC1

5) chain C
residue 452
type
sequence H
description binding site for residue ZN C 502
source : AC2

6) chain C
residue 457
type
sequence H
description binding site for residue ZN C 502
source : AC2

7) chain C
residue 475
type
sequence C
description binding site for residue ZN C 502
source : AC2

8) chain C
residue 478
type
sequence C
description binding site for residue ZN C 502
source : AC2

9) chain D
residue 437
type
sequence C
description binding site for residue ZN D 501
source : AC3

10) chain D
residue 440
type
sequence C
description binding site for residue ZN D 501
source : AC3

11) chain D
residue 460
type
sequence C
description binding site for residue ZN D 501
source : AC3

12) chain D
residue 463
type
sequence C
description binding site for residue ZN D 501
source : AC3

13) chain D
residue 451
type
sequence H
description binding site for residue ZN D 502
source : AC4

14) chain D
residue 456
type
sequence H
description binding site for residue ZN D 502
source : AC4

15) chain D
residue 474
type
sequence C
description binding site for residue ZN D 502
source : AC4

16) chain D
residue 477
type
sequence C
description binding site for residue ZN D 502
source : AC4

17) chain D
residue 472
type
sequence A
description binding site for residue SO4 D 503
source : AC5

18) chain D
residue 473
type
sequence S
description binding site for residue SO4 D 503
source : AC5

19) chain D
residue 478
type
sequence K
description binding site for residue SO4 D 503
source : AC5

20) chain E
residue 139
type
sequence R
description binding site for residue SO4 D 503
source : AC5

21) chain H
residue 472
type
sequence A
description binding site for residue SO4 D 503
source : AC5

22) chain H
residue 473
type
sequence S
description binding site for residue SO4 D 503
source : AC5

23) chain H
residue 478
type
sequence K
description binding site for residue SO4 D 503
source : AC5

24) chain G
residue 438
type
sequence C
description binding site for residue ZN G 501
source : AC6

25) chain G
residue 441
type
sequence C
description binding site for residue ZN G 501
source : AC6

26) chain G
residue 461
type
sequence C
description binding site for residue ZN G 501
source : AC6

27) chain G
residue 464
type
sequence C
description binding site for residue ZN G 501
source : AC6

28) chain G
residue 452
type
sequence H
description binding site for residue ZN G 502
source : AC7

29) chain G
residue 457
type
sequence H
description binding site for residue ZN G 502
source : AC7

30) chain G
residue 475
type
sequence C
description binding site for residue ZN G 502
source : AC7

31) chain G
residue 478
type
sequence C
description binding site for residue ZN G 502
source : AC7

32) chain H
residue 451
type
sequence H
description binding site for residue ZN H 501
source : AC8

33) chain H
residue 456
type
sequence H
description binding site for residue ZN H 501
source : AC8

34) chain H
residue 474
type
sequence C
description binding site for residue ZN H 501
source : AC8

35) chain H
residue 477
type
sequence C
description binding site for residue ZN H 501
source : AC8

36) chain H
residue 437
type
sequence C
description binding site for residue ZN H 502
source : AC9

37) chain H
residue 440
type
sequence C
description binding site for residue ZN H 502
source : AC9

38) chain H
residue 460
type
sequence C
description binding site for residue ZN H 502
source : AC9

39) chain H
residue 463
type
sequence C
description binding site for residue ZN H 502
source : AC9

40) chain D
residue 442
type
sequence K
description binding site for residue SO4 H 503
source : AD1

41) chain D
residue 443
type
sequence R
description binding site for residue SO4 H 503
source : AD1

42) chain D
residue 466
type
sequence R
description binding site for residue SO4 H 503
source : AD1

43) chain H
residue 442
type
sequence K
description binding site for residue SO4 H 503
source : AD1

44) chain H
residue 443
type
sequence R
description binding site for residue SO4 H 503
source : AD1

45) chain H
residue 466
type
sequence R
description binding site for residue SO4 H 503
source : AD1

46) chain E
residue 75
type
sequence H
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

47) chain E
residue 77
type
sequence N
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

48) chain E
residue 78
type
sequence I
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

49) chain E
residue 84
type
sequence I
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

50) chain E
residue 86
type
sequence L
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

51) chain E
residue 117
type
sequence D
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

52) chain E
residue 119
type
sequence L
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

53) chain E
residue 120
type
sequence V
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

54) chain E
residue 134
type
sequence Y
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

55) chain F
residue 75
type
sequence G
description binding site for Di-peptide GLY F 76 and LYS E 85
source : AD2

56) chain C
residue 429
type MOD_RES
sequence S
description Phosphoserine; by ATM => ECO:0000269|PubMed:19816404
source Swiss-Prot : SWS_FT_FI2

57) chain G
residue 429
type MOD_RES
sequence S
description Phosphoserine; by ATM => ECO:0000269|PubMed:19816404
source Swiss-Prot : SWS_FT_FI2

58) chain B
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299

59) chain D
residue 437-478
type ZN_FING
sequence CSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPI
CK
description RING-type => ECO:0000255|PROSITE-ProRule:PRU00175
source Swiss-Prot : SWS_FT_FI1

60) chain H
residue 437-478
type ZN_FING
sequence CSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPI
CK
description RING-type => ECO:0000255|PROSITE-ProRule:PRU00175
source Swiss-Prot : SWS_FT_FI1


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