eF-site ID 5lwe-AB
PDB Code 5lwe
Chain A, B

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Title Crystal structure of the human CC chemokine receptor type 9 (CCR9) in complex with vercirnon
Classification MEMBRANE PROTEIN
Compound C-C chemokine receptor type 9
Source (CCR9_HUMAN)
Sequence A:  RQFASHFLPPLYWLVFIVGALGNSLVILVYWYCARAKTAT
DMFLLNLAIADLLFLVTLPFWAIATFMCKVVNSMYKMNFY
SCVLLIMCICVDRYIAIAQAMRAHTWREKRLLYSKMVCFT
IWVLAAALCIPEILYCTTKLKSAVLALKVILGFFLPFVVM
ACCYTIIIHTLIQAKKSSKHKALKATITVLTVFVLSQFPY
NCILLVQTIDAYAMFISNCAVSTAIDICFQVTQAIAFFHS
CLNPVLYVFVGERFRRDLVKTLKNLGAISQAAAHH
B:  NFEDFYCEKNNVRQFASHFLPPLYWLVFIVGALGNSLVIL
VYWYCARAKTATDMFLLNLAIADLLFLVTLPFWAIAAATF
MCKVVNSMYKMNFYSCVLLIMCICVDRYIAIAQAMRAHTW
REKRLLYSKMVCFTIWVLAAALCIPEILTKLKSAVLALKV
ILGFFLPFVVMACCYTIIIHTLIQAKKSSKHKALKATITV
LTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTAIDICF
QVTQAIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGAIS
QAAAH
Description


Functional site

1) chain A
residue 69
type
sequence V
description binding site for residue 79K A 401
source : AC1

2) chain A
residue 78
type
sequence R
description binding site for residue 79K A 401
source : AC1

3) chain A
residue 81
type
sequence T
description binding site for residue 79K A 401
source : AC1

4) chain A
residue 83
type
sequence T
description binding site for residue 79K A 401
source : AC1

5) chain A
residue 84
type
sequence D
description binding site for residue 79K A 401
source : AC1

6) chain A
residue 87
type
sequence L
description binding site for residue 79K A 401
source : AC1

7) chain A
residue 144
type
sequence R
description binding site for residue 79K A 401
source : AC1

8) chain A
residue 255
type
sequence A
description binding site for residue 79K A 401
source : AC1

9) chain A
residue 256
type
sequence T
description binding site for residue 79K A 401
source : AC1

10) chain A
residue 259
type
sequence V
description binding site for residue 79K A 401
source : AC1

11) chain A
residue 317
type
sequence Y
description binding site for residue 79K A 401
source : AC1

12) chain A
residue 321
type
sequence G
description binding site for residue 79K A 401
source : AC1

13) chain A
residue 322
type
sequence E
description binding site for residue 79K A 401
source : AC1

14) chain A
residue 323
type
sequence R
description binding site for residue 79K A 401
source : AC1

15) chain A
residue 324
type
sequence F
description binding site for residue 79K A 401
source : AC1

16) chain A
residue 327
type
sequence D
description binding site for residue 79K A 401
source : AC1

17) chain A
residue 265
type
sequence L
description binding site for residue OLA A 402
source : AC2

18) chain A
residue 250
type
sequence H
description binding site for residue OLA A 403
source : AC3

19) chain A
residue 234
type
sequence Y
description binding site for residue OLA A 404
source : AC4

20) chain A
residue 235
type
sequence T
description binding site for residue OLA A 404
source : AC4

21) chain A
residue 238
type
sequence I
description binding site for residue OLA A 404
source : AC4

22) chain A
residue 241
type
sequence L
description binding site for residue OLA A 404
source : AC4

23) chain B
residue 239
type
sequence H
description binding site for residue OLA A 404
source : AC4

24) chain A
residue 145
type
sequence Y
description binding site for residue OLA A 405
source : AC5

25) chain A
residue 239
type
sequence H
description binding site for residue OLA A 405
source : AC5

26) chain A
residue 74
type
sequence W
description binding site for residue OLA A 406
source : AC6

27) chain A
residue 96
type
sequence L
description binding site for residue OLA A 406
source : AC6

28) chain A
residue 56
type
sequence W
description binding site for residue OLA A 407
source : AC7

29) chain A
residue 102
type
sequence P
description binding site for residue OLA A 407
source : AC7

30) chain A
residue 106
type
sequence I
description binding site for residue OLA A 407
source : AC7

31) chain B
residue 53
type
sequence P
description binding site for residue OLA A 407
source : AC7

32) chain A
residue 96
type
sequence L
description binding site for residue OLA A 408
source : AC8

33) chain A
residue 128
type
sequence M
description binding site for residue OLA A 408
source : AC8

34) chain A
residue 173
type
sequence W
description binding site for residue OLA A 408
source : AC8

35) chain A
residue 64
type
sequence L
description binding site for residue OLA A 409
source : AC9

36) chain A
residue 164
type
sequence Y
description binding site for residue OLA A 411
source : AD1

37) chain A
residue 167
type
sequence M
description binding site for residue OLA A 411
source : AD1

38) chain B
residue 167
type
sequence M
description binding site for residue OLA A 411
source : AD1

39) chain A
residue 319
type
sequence F
description binding site for residue OLA A 412
source : AD2

40) chain A
residue 169
type
sequence C
description binding site for residue OLA A 413
source : AD3

41) chain A
residue 170
type
sequence F
description binding site for residue OLA A 413
source : AD3

42) chain A
residue 173
type
sequence W
description binding site for residue OLA A 413
source : AD3

43) chain A
residue 177
type
sequence A
description binding site for residue OLA A 413
source : AD3

44) chain A
residue 178
type
sequence A
description binding site for residue OLA A 413
source : AD3

45) chain A
residue 181
type
sequence I
description binding site for residue OLA A 413
source : AD3

46) chain B
residue 181
type
sequence I
description binding site for residue OLA A 413
source : AD3

47) chain A
residue 143
type
sequence D
description binding site for residue OLA A 414
source : AD4

48) chain A
residue 161
type
sequence R
description binding site for residue OLA A 414
source : AD4

49) chain B
residue 37
type
sequence Y
description binding site for residue OLA A 414
source : AD4

50) chain A
residue 70
type
sequence I
description binding site for residue OLA A 415
source : AD5

51) chain A
residue 68
type
sequence L
description binding site for residue OLA A 416
source : AD6

52) chain A
residue 328
type
sequence L
description binding site for residue OLA A 416
source : AD6

53) chain A
residue 335
type
sequence L
description binding site for residue OLA A 416
source : AD6

54) chain A
residue 336
type
sequence G
description binding site for residue OLA A 416
source : AD6

55) chain B
residue 325
type
sequence R
description binding site for residue OLA A 416
source : AD6

56) chain A
residue 308
type
sequence F
description binding site for residue CLR A 417
source : AD7

57) chain A
residue 144
type
sequence R
description binding site for residue MLI A 418
source : AD8

58) chain A
residue 147
type
sequence A
description binding site for residue MLI A 418
source : AD8

59) chain A
residue 161
type
sequence R
description binding site for residue MLI A 418
source : AD8

60) chain A
residue 323
type
sequence R
description binding site for residue MLI A 418
source : AD8

61) chain B
residue 69
type
sequence V
description binding site for residue 79K B 401
source : AD9

62) chain B
residue 78
type
sequence R
description binding site for residue 79K B 401
source : AD9

63) chain B
residue 81
type
sequence T
description binding site for residue 79K B 401
source : AD9

64) chain B
residue 83
type
sequence T
description binding site for residue 79K B 401
source : AD9

65) chain B
residue 84
type
sequence D
description binding site for residue 79K B 401
source : AD9

66) chain B
residue 87
type
sequence L
description binding site for residue 79K B 401
source : AD9

67) chain B
residue 144
type
sequence R
description binding site for residue 79K B 401
source : AD9

68) chain B
residue 252
type
sequence A
description binding site for residue 79K B 401
source : AD9

69) chain B
residue 255
type
sequence A
description binding site for residue 79K B 401
source : AD9

70) chain B
residue 256
type
sequence T
description binding site for residue 79K B 401
source : AD9

71) chain B
residue 259
type
sequence V
description binding site for residue 79K B 401
source : AD9

72) chain B
residue 317
type
sequence Y
description binding site for residue 79K B 401
source : AD9

73) chain B
residue 321
type
sequence G
description binding site for residue 79K B 401
source : AD9

74) chain B
residue 322
type
sequence E
description binding site for residue 79K B 401
source : AD9

75) chain B
residue 323
type
sequence R
description binding site for residue 79K B 401
source : AD9

76) chain B
residue 324
type
sequence F
description binding site for residue 79K B 401
source : AD9

77) chain B
residue 327
type
sequence D
description binding site for residue 79K B 401
source : AD9

78) chain B
residue 254
type
sequence K
description binding site for residue OLA B 402
source : AE1

79) chain B
residue 250
type
sequence H
description binding site for residue OLA B 403
source : AE2

80) chain B
residue 254
type
sequence K
description binding site for residue OLA B 403
source : AE2

81) chain B
residue 258
type
sequence T
description binding site for residue OLA B 403
source : AE2

82) chain B
residue 261
type
sequence T
description binding site for residue OLA B 403
source : AE2

83) chain B
residue 262
type
sequence V
description binding site for residue OLA B 403
source : AE2

84) chain B
residue 265
type
sequence L
description binding site for residue OLA B 403
source : AE2

85) chain B
residue 266
type
sequence S
description binding site for residue OLA B 403
source : AE2

86) chain B
residue 234
type
sequence Y
description binding site for residue OLA B 404
source : AE3

87) chain B
residue 250
type
sequence H
description binding site for residue OLA B 404
source : AE3

88) chain B
residue 257
type
sequence I
description binding site for residue OLA B 404
source : AE3

89) chain A
residue 239
type
sequence H
description binding site for residue OLA B 405
source : AE4

90) chain B
residue 250
type
sequence H
description binding site for residue OLA B 405
source : AE4

91) chain B
residue 86
type
sequence F
description binding site for residue OLA B 406
source : AE5

92) chain B
residue 138
type
sequence M
description binding site for residue OLA B 406
source : AE5

93) chain B
residue 143
type
sequence D
description binding site for residue OLA B 406
source : AE5

94) chain B
residue 146
type
sequence I
description binding site for residue OLA B 406
source : AE5

95) chain B
residue 161
type
sequence R
description binding site for residue OLA B 406
source : AE5

96) chain B
residue 175
type
sequence L
description binding site for residue OLA B 406
source : AE5

97) chain B
residue 145
type
sequence Y
description binding site for residue OLA B 407
source : AE6

98) chain B
residue 227
type
sequence F
description binding site for residue OLA B 407
source : AE6

99) chain B
residue 235
type
sequence T
description binding site for residue OLA B 407
source : AE6

100) chain B
residue 170
type
sequence F
description binding site for residue OLA B 408
source : AE7

101) chain B
residue 74
type
sequence W
description binding site for residue OLA B 409
source : AE8

102) chain B
residue 85
type
sequence M
description binding site for residue OLA B 409
source : AE8

103) chain B
residue 89
type
sequence N
description binding site for residue OLA B 409
source : AE8

104) chain B
residue 92
type
sequence I
description binding site for residue OLA B 410
source : AE9

105) chain B
residue 67
type
sequence S
description binding site for residue OLA B 411
source : AF1

106) chain A
residue 285
type
sequence F
description binding site for residue OLA B 414
source : AF3

107) chain B
residue 279
type
sequence I
description binding site for residue OLA B 414
source : AF3

108) chain B
residue 283
type
sequence A
description binding site for residue OLA B 414
source : AF3

109) chain B
residue 285
type
sequence F
description binding site for residue OLA B 414
source : AF3

110) chain B
residue 291
type
sequence V
description binding site for residue OLA B 414
source : AF3

111) chain B
residue 144
type
sequence R
description binding site for residue MLI B 415
source : AF4

112) chain B
residue 147
type
sequence A
description binding site for residue MLI B 415
source : AF4

113) chain B
residue 161
type
sequence R
description binding site for residue MLI B 415
source : AF4

114) chain A
residue 64
type
sequence L
description binding site for residues OLA A 410 and OLA B 412
source : AF5

115) chain A
residue 319
type
sequence F
description binding site for residues OLA A 410 and OLA B 412
source : AF5

116) chain A
residue 319
type
sequence F
description binding site for residues OLA A 410 and OLA B 412
source : AF5

117) chain A
residue 339
type
sequence S
description binding site for residues OLA A 410 and OLA B 412
source : AF5

118) chain B
residue 64
type
sequence L
description binding site for residues OLA A 410 and OLA B 412
source : AF5

119) chain B
residue 92
type
sequence I
description binding site for residues OLA A 410 and OLA B 412
source : AF5

120) chain A
residue 132-148
type prosite
sequence SCVLLIMCICVDRYIAI
description G_PROTEIN_RECEP_F1_1 G-protein coupled receptors family 1 signature. SCVlLIMCICVDRYIaI
source prosite : PS00237

121) chain A
residue 49-74
type TRANSMEM
sequence HFLPPLYWLVFIVGALGNSLVILVYW
description Helical; Name=1 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI1

122) chain B
residue 49-74
type TRANSMEM
sequence HFLPPLYWLVFIVGALGNSLVILVYW
description Helical; Name=1 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI1

123) chain A
residue 75-85
type TOPO_DOM
sequence YCARAKTATDM
description Cytoplasmic => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI2

124) chain A
residue 151-159
type TOPO_DOM
sequence AMRAHTWRE
description Cytoplasmic => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI2

125) chain A
residue 244-248
type TOPO_DOM
sequence AKKSS
description Cytoplasmic => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI2

126) chain B
residue 75-85
type TOPO_DOM
sequence YCARAKTATDM
description Cytoplasmic => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI2

127) chain B
residue 151-159
type TOPO_DOM
sequence AMRAHTWRE
description Cytoplasmic => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI2

128) chain B
residue 244-248
type TOPO_DOM
sequence AKKSS
description Cytoplasmic => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI2

129) chain B
residue 86-109
type TRANSMEM
sequence FLLNLAIADLLFLVTLPFWAIAAA
description Helical; Name=2 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI3

130) chain A
residue 186-208
type TOPO_DOM
sequence YCTT
description Extracellular => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI4

131) chain A
residue 284-290
type TOPO_DOM
sequence MFISNCA
description Extracellular => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI4

132) chain B
residue 284-290
type TOPO_DOM
sequence MFISNCA
description Extracellular => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI4

133) chain A
residue 121-150
type TRANSMEM
sequence VVNSMYKMNFYSCVLLIMCICVDRYIAIAQ
description Helical; Name=3 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI5

134) chain B
residue 121-150
type TRANSMEM
sequence VVNSMYKMNFYSCVLLIMCICVDRYIAIAQ
description Helical; Name=3 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI5

135) chain A
residue 160-185
type TRANSMEM
sequence KRLLYSKMVCFTIWVLAAALCIPEIL
description Helical; Name=4 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI6

136) chain B
residue 160-185
type TRANSMEM
sequence KRLLYSKMVCFTIWVLAAALCIPEIL
description Helical; Name=4 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI6

137) chain A
residue 209-243
type TRANSMEM
sequence KLKSAVLALKVILGFFLPFVVMACCYTIIIHTLIQ
description Helical; Name=5 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI7

138) chain B
residue 209-243
type TRANSMEM
sequence KLKSAVLALKVILGFFLPFVVMACCYTIIIHTLIQ
description Helical; Name=5 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI7

139) chain A
residue 249-283
type TRANSMEM
sequence KHKALKATITVLTVFVLSQFPYNCILLVQTIDAYA
description Helical; Name=6 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI8

140) chain B
residue 249-283
type TRANSMEM
sequence KHKALKATITVLTVFVLSQFPYNCILLVQTIDAYA
description Helical; Name=6 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI8

141) chain A
residue 291-321
type TRANSMEM
sequence VSTAIDICFQVTQAIAFFHSCLNPVLYVFVG
description Helical; Name=7 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI9

142) chain B
residue 291-321
type TRANSMEM
sequence VSTAIDICFQVTQAIAFFHSCLNPVLYVFVG
description Helical; Name=7 => ECO:0000269|PubMed:27926729
source Swiss-Prot : SWS_FT_FI9

143) chain B
residue 32
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI10


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