|
eF-site ID
|
5kwb-A |
PDB Code
|
5kwb |
Chain
|
A |
|
click to enlarge
|
|
Title
|
Crystal Structure of the Receptor Binding Domain of the Spike Glycoprotein of Human Betacoronavirus HKU1 (HKU1 1A-CTD, 1.9 angstrom, molecular replacement) |
Classification
|
VIRAL PROTEIN |
Compound
|
Spike glycoprotein |
Source
|
Human coronavirus HKU1 (isolate N1) (HCoV-HKU1) (SPIKE_CVHN1) |
|
Sequence
|
A: |
VKPVATVHRRIPDLPDCDIDKWLNNFNVPSPLNWERKIFS
NCNFNLSTLLRLVHTDSFSCNNFDESKIYGSCFKSIVLDK
FAIPNSRRSDLQLGSSGFLQSSNYKIDTTSSSCQLYYSLP
AINVTINNYNPSSWNRRYGFNNFNLSSHSVVYSRYCFSVN
NTFCPCAKPSFASSCKSHKPPSASCPIGTNYRSCESTTVL
DHTDWCRCSCLPDPITAYDPRSCSQKKSLVGVGEHCAGFG
VDEEKCGVLDGSYNVSCLCSTDAFLGWSYDTCVSNNRCNI
FSNFILNGINSGTTCSNDLLQPNTEVFTDVCVDYDLYGIT
GQGIFKEVSAVYYNSWQNLLYDSNGNIIGFKDFVTNKTYN
IFPC
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
355 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
A |
residue |
433 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
A |
residue |
454 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
A |
residue |
470 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
5)
|
chain |
A |
residue |
564 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
6)
|
chain |
A |
residue |
666 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|