eF-site ID 5kj8-K
PDB Code 5kj8
Chain K

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Title Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form) - from synchrotron diffraction
Classification ENDOCYTOSIS,EXOCYTOSIS
Compound Vesicle-associated membrane protein 3
Source Rattus norvegicus (Rat) (SYT1_RAT)
Sequence K:  KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPY
VKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELG
GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWR
DLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLK
KMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYN
ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGY
NSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAV
Description


Functional site

1) chain K
residue 302
type
sequence M
description binding site for residue CA K 501
source : AD1

2) chain K
residue 303
type
sequence D
description binding site for residue CA K 501
source : AD1

3) chain K
residue 307
type
sequence L
description binding site for residue CA K 501
source : AD1

4) chain K
residue 308
type
sequence S
description binding site for residue CA K 501
source : AD1

5) chain K
residue 363
type
sequence D
description binding site for residue CA K 501
source : AD1

6) chain K
residue 303
type
sequence D
description binding site for residue CA K 502
source : AD2

7) chain K
residue 309
type
sequence D
description binding site for residue CA K 502
source : AD2

8) chain K
residue 363
type
sequence D
description binding site for residue CA K 502
source : AD2

9) chain K
residue 364
type
sequence Y
description binding site for residue CA K 502
source : AD2

10) chain K
residue 365
type
sequence D
description binding site for residue CA K 502
source : AD2

11) chain K
residue 172
type
sequence D
description binding site for residue CA K 503
source : AD3

12) chain K
residue 230
type
sequence D
description binding site for residue CA K 503
source : AD3

13) chain K
residue 231
type
sequence F
description binding site for residue CA K 503
source : AD3

14) chain K
residue 232
type
sequence D
description binding site for residue CA K 503
source : AD3

15) chain K
residue 172
type
sequence D
description binding site for residue CA K 504
source : AD4

16) chain K
residue 178
type
sequence D
description binding site for residue CA K 504
source : AD4

17) chain K
residue 231
type
sequence F
description binding site for residue CA K 504
source : AD4

18) chain K
residue 171
type BINDING
sequence L
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

19) chain K
residue 172
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

20) chain K
residue 178
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

21) chain K
residue 230
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

22) chain K
residue 231
type BINDING
sequence F
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

23) chain K
residue 232
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

24) chain K
residue 235
type BINDING
sequence S
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

25) chain K
residue 236
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

26) chain K
residue 238
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

27) chain K
residue 303
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

28) chain K
residue 309
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

29) chain K
residue 363
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

30) chain K
residue 365
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

31) chain K
residue 371
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

32) chain K
residue 229
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:P46096
source Swiss-Prot : SWS_FT_FI2

33) chain K
residue 264
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P46096
source Swiss-Prot : SWS_FT_FI3

34) chain K
residue 342
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI4

35) chain K
residue 344
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI4


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