eF-site ID 5kj8-E
PDB Code 5kj8
Chain E

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Title Structure of the Ca2+-bound synaptotagmin-1 SNARE complex (long unit cell form) - from synchrotron diffraction
Classification ENDOCYTOSIS,EXOCYTOSIS
Compound Vesicle-associated membrane protein 3
Source null (SYT1_RAT)
Sequence E:  KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPY
VKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELG
GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWR
DLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLK
KMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYN
ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGY
NSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAMLAV
Description


Functional site

1) chain E
residue 303
type
sequence D
description binding site for residue CA E 501
source : AC2

2) chain E
residue 309
type
sequence D
description binding site for residue CA E 501
source : AC2

3) chain E
residue 363
type
sequence D
description binding site for residue CA E 501
source : AC2

4) chain E
residue 364
type
sequence Y
description binding site for residue CA E 501
source : AC2

5) chain E
residue 365
type
sequence D
description binding site for residue CA E 501
source : AC2

6) chain E
residue 302
type
sequence M
description binding site for residue CA E 502
source : AC3

7) chain E
residue 303
type
sequence D
description binding site for residue CA E 502
source : AC3

8) chain E
residue 363
type
sequence D
description binding site for residue CA E 502
source : AC3

9) chain E
residue 365
type
sequence D
description binding site for residue CA E 502
source : AC3

10) chain E
residue 172
type
sequence D
description binding site for residue CA E 503
source : AC4

11) chain E
residue 230
type
sequence D
description binding site for residue CA E 503
source : AC4

12) chain E
residue 231
type
sequence F
description binding site for residue CA E 503
source : AC4

13) chain E
residue 232
type
sequence D
description binding site for residue CA E 503
source : AC4

14) chain E
residue 172
type
sequence D
description binding site for residue CA E 504
source : AC5

15) chain E
residue 178
type
sequence D
description binding site for residue CA E 504
source : AC5

16) chain E
residue 230
type
sequence D
description binding site for residue CA E 504
source : AC5

17) chain E
residue 231
type
sequence F
description binding site for residue CA E 504
source : AC5

18) chain E
residue 346
type
sequence E
description binding site for residue CA K 504
source : AD4

19) chain E
residue 303
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

20) chain E
residue 309
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

21) chain E
residue 363
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

22) chain E
residue 365
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

23) chain E
residue 371
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

24) chain E
residue 230
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

25) chain E
residue 231
type BINDING
sequence F
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

26) chain E
residue 232
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

27) chain E
residue 235
type BINDING
sequence S
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

28) chain E
residue 236
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

29) chain E
residue 238
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

30) chain E
residue 172
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

31) chain E
residue 178
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

32) chain E
residue 171
type BINDING
sequence L
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00041
source Swiss-Prot : SWS_FT_FI1

33) chain E
residue 229
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:P46096
source Swiss-Prot : SWS_FT_FI2

34) chain E
residue 264
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P46096
source Swiss-Prot : SWS_FT_FI3

35) chain E
residue 344
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI4

36) chain E
residue 342
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI4


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