eF-site ID 5kce-B
PDB Code 5kce
Chain B

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Title Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with an N-methyl, 2-chlorobenzyl OBHS-N derivative
Classification TRANSCRIPTION
Compound Estrogen receptor
Source Homo sapiens (Human) (NCOA2_HUMAN)
Sequence B:  SLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMG
LLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWL
EILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEI
FDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSS
TLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQQQHQRL
AQLLLILSHIRHMSNKGMEHLYSMKPLSDLLLEMLDAHR
Description


Functional site

1) chain B
residue 343
type
sequence M
description binding site for residue OB3 B 601
source : AC3

2) chain B
residue 346
type
sequence L
description binding site for residue OB3 B 601
source : AC3

3) chain B
residue 347
type
sequence T
description binding site for residue OB3 B 601
source : AC3

4) chain B
residue 353
type
sequence E
description binding site for residue OB3 B 601
source : AC3

5) chain B
residue 387
type
sequence L
description binding site for residue OB3 B 601
source : AC3

6) chain B
residue 388
type
sequence M
description binding site for residue OB3 B 601
source : AC3

7) chain B
residue 394
type
sequence R
description binding site for residue OB3 B 601
source : AC3

8) chain B
residue 404
type
sequence F
description binding site for residue OB3 B 601
source : AC3

9) chain B
residue 418
type
sequence V
description binding site for residue OB3 B 601
source : AC3

10) chain B
residue 419
type
sequence E
description binding site for residue OB3 B 601
source : AC3

11) chain B
residue 420
type
sequence G
description binding site for residue OB3 B 601
source : AC3

12) chain B
residue 421
type
sequence M
description binding site for residue OB3 B 601
source : AC3

13) chain B
residue 424
type
sequence I
description binding site for residue OB3 B 601
source : AC3

14) chain B
residue 521
type
sequence G
description binding site for residue OB3 B 601
source : AC3

15) chain B
residue 524
type
sequence H
description binding site for residue OB3 B 601
source : AC3

16) chain B
residue 525
type
sequence L
description binding site for residue OB3 B 601
source : AC3

17) chain B
residue 358-423
type DNA_BIND
sequence INWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSME
HPGKLLFAPNLLLDRNQGKCVEGMVE
description Nuclear receptor => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI1

18) chain B
residue 358-378
type ZN_FING
sequence INWAKRVPGFVDLTLHDQVHL
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

19) chain B
residue 394-418
type ZN_FING
sequence RSMEHPGKLLFAPNLLLDRNQGKCV
description NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
source Swiss-Prot : SWS_FT_FI2

20) chain B
residue 526
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9338790, ECO:0000269|PubMed:9600906, ECO:0007744|PDB:1A52, ECO:0007744|PDB:1ERE
source Swiss-Prot : SWS_FT_FI3

21) chain B
residue 340
type MOD_RES
sequence A
description Phosphoserine; by CK2 => ECO:0000269|PubMed:7838153
source Swiss-Prot : SWS_FT_FI4

22) chain B
residue 433
type MOD_RES
sequence S
description Asymmetric dimethylarginine; by PRMT1 => ECO:0000269|PubMed:18657504, ECO:0000269|PubMed:24498420
source Swiss-Prot : SWS_FT_FI5


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