eF-site ID 5kal-A
PDB Code 5kal
Chain A

click to enlarge
Title Terminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UpU
Classification Transferase/RNA
Compound RNA uridylyltransferase 4
Source Trypanosoma brucei (5KAL)
Sequence A:  PPSPAVVGRSLVNSFKQFVSHVDATYRLVLDCVAAVDPLM
RLYTFGSTVVYGVHEKGSDVDFVVLNKTDVEDGKGGDAAT
QVAKGLQADILAKLARVIRQKHLSWNVEEVRRTRVPVVRV
KGGGAVDFDITAYRRNGVRNSALLRAYFEQNPPCRWLSMS
IKRWSKQTGLNASVIGGSITSYGFNLMVVYYLLQRNHLQF
VPPSTIDVSRVEPLPPHLPLEEPADEGLELGTQVLDFLHF
FLHEFDSDKQVISLNRPGITTKEELDWTKSAEDFARMNGE
KVHYQWCIEDPYELNLNVGRNVTPLKRDFLRRHLEKARDT
ALLTI
Description


Functional site

1) chain A
residue 52
type
sequence F
description binding site for residue UTP A 501
source : AC1

2) chain A
residue 54
type
sequence S
description binding site for residue UTP A 501
source : AC1

3) chain A
residue 65
type
sequence S
description binding site for residue UTP A 501
source : AC1

4) chain A
residue 66
type
sequence D
description binding site for residue UTP A 501
source : AC1

5) chain A
residue 68
type
sequence D
description binding site for residue UTP A 501
source : AC1

6) chain A
residue 144
type
sequence G
description binding site for residue UTP A 501
source : AC1

7) chain A
residue 147
type
sequence N
description binding site for residue UTP A 501
source : AC1

8) chain A
residue 148
type
sequence S
description binding site for residue UTP A 501
source : AC1

9) chain A
residue 169
type
sequence K
description binding site for residue UTP A 501
source : AC1

10) chain A
residue 173
type
sequence K
description binding site for residue UTP A 501
source : AC1

11) chain A
residue 188
type
sequence S
description binding site for residue UTP A 501
source : AC1

12) chain A
residue 189
type
sequence Y
description binding site for residue UTP A 501
source : AC1

13) chain A
residue 66
type
sequence D
description binding site for residue MG A 502
source : AC2

14) chain A
residue 68
type
sequence D
description binding site for residue MG A 502
source : AC2

15) chain A
residue 54
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17189640, ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2IKF, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 65
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17189640, ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2IKF, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 144
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17189640, ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2IKF, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 169
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:17189640, ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2IKF, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 173
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:17189640, ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2IKF, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI1

20) chain A
residue 188
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17189640, ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2IKF, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI1

21) chain A
residue 66
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17189640, ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2IKF, ECO:0007744|PDB:2NOM, ECO:0007744|PDB:2Q0C, ECO:0007744|PDB:2Q0D, ECO:0007744|PDB:2Q0E, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:2Q0G, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI2

22) chain A
residue 68
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17189640, ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2IKF, ECO:0007744|PDB:2NOM, ECO:0007744|PDB:2Q0C, ECO:0007744|PDB:2Q0D, ECO:0007744|PDB:2Q0E, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:2Q0G, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 121
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:17785418, ECO:0000269|PubMed:27744351, ECO:0007744|PDB:2Q0F, ECO:0007744|PDB:2Q0G, ECO:0007744|PDB:5KAL
source Swiss-Prot : SWS_FT_FI3

24) chain A
residue 136
type SITE
sequence D
description Important for catalytic activity => ECO:0000269|PubMed:17189640
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links