eF-site ID 5kai-c PDB Code 5kai Chain c click to enlarge Title NH3-bound RT XFEL structure of Photosystem II 500 ms after the 2nd illumination (2F) at 2.8 A resolution Classification ELECTRON TRANSPORT Compound Photosystem II protein D1 1 Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1); Sequence c:  ATNRDQESSGFAWWAGNARLINLSGKLLGAHVAHAGLIVF WAGAMTLFELAHFIPEKPMYEQGLILIPHIATLGWGVGPG GEVVDTFPFFVVGVVHLISSAVLGFGGVYHAIRGPETLEE YSSFFGYDWKDKNKMTTILGFHLIVLGIGALLLVAKAMFF GGLYDTWAPGGGDVRVITNPTLDPRVIFGYLLKSPFGGEG WIVSVNNLEDVVGGHIWIGLICIAGGIWHILTTPFGWARR AFIWSGEAYLSYSLGALSMMGFIATCFVWFNNTVYPSEFY GPTGPEASQAQAMTFLIRDQKLGANVGSAQGPTGLGKYLM RSPTGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKIKN DIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNFVSP RSWLATSHFVLAFFFLVGHLWHAGRARAAAAGFEKGIDRE SEPVLSMPSLD Description Functional site 1) chain c residue 354 type sequence E description binding site for residue OEX a 702 source : AK8 2) chain c residue 357 type sequence R description binding site for residue OEX a 702 source : AK8 3) chain c residue 354 type sequence E description binding site for residue CL a 705 source : AL2 4) chain c residue 28 type sequence Q description binding site for residue SQD a 714 source : AM2 5) chain c residue 36 type sequence W description binding site for residue SQD a 714 source : AM2 6) chain c residue 213 type sequence L description binding site for residue LMG a 715 source : AM3 7) chain c residue 214 type sequence L description binding site for residue LMG a 715 source : AM3 8) chain c residue 215 type sequence K description binding site for residue LMG a 715 source : AM3 9) chain c residue 216 type sequence S description binding site for residue LMG a 715 source : AM3 10) chain c residue 223 type sequence W description binding site for residue LMG a 715 source : AM3 11) chain c residue 36 type sequence W description binding site for residue LHG a 720 source : AM5 12) chain c residue 443 type sequence W description binding site for residue LHG a 720 source : AM5 13) chain c residue 447 type sequence R description binding site for residue LHG a 720 source : AM5 14) chain c residue 181 type sequence F description binding site for residue CLA b 607 source : AM8 15) chain c residue 170 type sequence I description binding site for residue LMG b 627 source : AP1 16) chain c residue 173 type sequence L description binding site for residue LMG b 627 source : AP1 17) chain c residue 201 type sequence N description binding site for residue LMG b 627 source : AP1 18) chain c residue 202 type sequence P description binding site for residue LMG b 627 source : AP1 19) chain c residue 95 type sequence L description binding site for residue CLA c 501 source : AP4 20) chain c residue 168 type sequence L description binding site for residue CLA c 501 source : AP4 21) chain c residue 171 type sequence G description binding site for residue CLA c 501 source : AP4 22) chain c residue 172 type sequence A description binding site for residue CLA c 501 source : AP4 23) chain c residue 175 type sequence L description binding site for residue CLA c 501 source : AP4 24) chain c residue 224 type sequence I description binding site for residue CLA c 501 source : AP4 25) chain c residue 233 type sequence V description binding site for residue CLA c 501 source : AP4 26) chain c residue 237 type sequence H description binding site for residue CLA c 501 source : AP4 27) chain c residue 282 type sequence M description binding site for residue CLA c 501 source : AP4 28) chain c residue 285 type sequence I description binding site for residue CLA c 501 source : AP4 29) chain c residue 297 type sequence Y description binding site for residue CLA c 501 source : AP4 30) chain c residue 63 type sequence W description binding site for residue CLA c 502 source : AP5 31) chain c residue 91 type sequence H description binding site for residue CLA c 502 source : AP5 32) chain c residue 174 type sequence L description binding site for residue CLA c 502 source : AP5 33) chain c residue 279 type sequence L description binding site for residue CLA c 502 source : AP5 34) chain c residue 282 type sequence M description binding site for residue CLA c 502 source : AP5 35) chain c residue 286 type sequence A description binding site for residue CLA c 502 source : AP5 36) chain c residue 297 type sequence Y description binding site for residue CLA c 502 source : AP5 37) chain c residue 430 type sequence H description binding site for residue CLA c 502 source : AP5 38) chain c residue 433 type sequence L description binding site for residue CLA c 502 source : AP5 39) chain c residue 437 type sequence F description binding site for residue CLA c 502 source : AP5 40) chain c residue 60 type sequence I description binding site for residue CLA c 503 source : AP6 41) chain c residue 61 type sequence V description binding site for residue CLA c 503 source : AP6 42) chain c residue 64 type sequence A description binding site for residue CLA c 503 source : AP6 43) chain c residue 68 type sequence T description binding site for residue CLA c 503 source : AP6 44) chain c residue 88 type sequence L description binding site for residue CLA c 503 source : AP6 45) chain c residue 91 type sequence H description binding site for residue CLA c 503 source : AP6 46) chain c residue 92 type sequence I description binding site for residue CLA c 503 source : AP6 47) chain c residue 114 type sequence V description binding site for residue CLA c 503 source : AP6 48) chain c residue 118 type sequence H description binding site for residue CLA c 503 source : AP6 49) chain c residue 63 type sequence W description binding site for residue CLA c 504 source : AP7 50) chain c residue 70 type sequence F description binding site for residue CLA c 504 source : AP7 51) chain c residue 84 type sequence Q description binding site for residue CLA c 504 source : AP7 52) chain c residue 85 type sequence G description binding site for residue CLA c 504 source : AP7 53) chain c residue 425 type sequence W description binding site for residue CLA c 504 source : AP7 54) chain c residue 429 type sequence S description binding site for residue CLA c 504 source : AP7 55) chain c residue 264 type sequence F description binding site for residue CLA c 505 source : AP8 56) chain c residue 273 type sequence S description binding site for residue CLA c 505 source : AP8 57) chain c residue 274 type sequence Y description binding site for residue CLA c 505 source : AP8 58) chain c residue 277 type sequence G description binding site for residue CLA c 505 source : AP8 59) chain c residue 441 type sequence H description binding site for residue CLA c 505 source : AP8 60) chain c residue 442 type sequence L description binding site for residue CLA c 505 source : AP8 61) chain c residue 445 type sequence A description binding site for residue CLA c 505 source : AP8 62) chain c residue 449 type sequence R description binding site for residue CLA c 505 source : AP8 63) chain c residue 243 type sequence I description binding site for residue CLA c 506 source : AP9 64) chain c residue 247 type sequence G description binding site for residue CLA c 506 source : AP9 65) chain c residue 250 type sequence W description binding site for residue CLA c 506 source : AP9 66) chain c residue 251 type sequence H description binding site for residue CLA c 506 source : AP9 67) chain c residue 255 type sequence T description binding site for residue CLA c 506 source : AP9 68) chain c residue 256 type sequence P description binding site for residue CLA c 506 source : AP9 69) chain c residue 257 type sequence F description binding site for residue CLA c 506 source : AP9 70) chain c residue 259 type sequence W description binding site for residue CLA c 506 source : AP9 71) chain c residue 260 type sequence A description binding site for residue CLA c 506 source : AP9 72) chain c residue 264 type sequence F description binding site for residue CLA c 506 source : AP9 73) chain c residue 157 type sequence M description binding site for residue CLA c 507 source : AQ1 74) chain c residue 161 type sequence L description binding site for residue CLA c 507 source : AQ1 75) chain c residue 164 type sequence H description binding site for residue CLA c 507 source : AQ1 76) chain c residue 168 type sequence L description binding site for residue CLA c 507 source : AQ1 77) chain c residue 266 type sequence W description binding site for residue CLA c 507 source : AQ1 78) chain c residue 271 type sequence Y description binding site for residue CLA c 507 source : AQ1 79) chain c residue 274 type sequence Y description binding site for residue CLA c 507 source : AQ1 80) chain c residue 275 type sequence S description binding site for residue CLA c 507 source : AQ1 81) chain c residue 282 type sequence M description binding site for residue CLA c 507 source : AQ1 82) chain c residue 33 type sequence F description binding site for residue CLA c 508 source : AQ2 83) chain c residue 36 type sequence W description binding site for residue CLA c 508 source : AQ2 84) chain c residue 37 type sequence A description binding site for residue CLA c 508 source : AQ2 85) chain c residue 38 type sequence G description binding site for residue CLA c 508 source : AQ2 86) chain c residue 39 type sequence N description binding site for residue CLA c 508 source : AQ2 87) chain c residue 276 type sequence L description binding site for residue CLA c 508 source : AQ2 88) chain c residue 436 type sequence F description binding site for residue CLA c 508 source : AQ2 89) chain c residue 437 type sequence F description binding site for residue CLA c 508 source : AQ2 90) chain c residue 440 type sequence G description binding site for residue CLA c 508 source : AQ2 91) chain c residue 443 type sequence W description binding site for residue CLA c 508 source : AQ2 92) chain c residue 444 type sequence H description binding site for residue CLA c 508 source : AQ2 93) chain c residue 39 type sequence N description binding site for residue CLA c 509 source : AQ3 94) chain c residue 49 type sequence L description binding site for residue CLA c 509 source : AQ3 95) chain c residue 52 type sequence A description binding site for residue CLA c 509 source : AQ3 96) chain c residue 53 type sequence H description binding site for residue CLA c 509 source : AQ3 97) chain c residue 56 type sequence H description binding site for residue CLA c 509 source : AQ3 98) chain c residue 268 type sequence G description binding site for residue CLA c 509 source : AQ3 99) chain c residue 271 type sequence Y description binding site for residue CLA c 509 source : AQ3 100) chain c residue 272 type sequence L description binding site for residue CLA c 509 source : AQ3 101) chain c residue 275 type sequence S description binding site for residue CLA c 509 source : AQ3 102) chain c residue 279 type sequence L description binding site for residue CLA c 509 source : AQ3 103) chain c residue 39 type sequence N description binding site for residue CLA c 510 source : AQ4 104) chain c residue 56 type sequence H description binding site for residue CLA c 510 source : AQ4 105) chain c residue 59 type sequence L description binding site for residue CLA c 510 source : AQ4 106) chain c residue 60 type sequence I description binding site for residue CLA c 510 source : AQ4 107) chain c residue 436 type sequence F description binding site for residue CLA c 510 source : AQ4 108) chain c residue 437 type sequence F description binding site for residue CLA c 510 source : AQ4 109) chain c residue 25 type sequence N description binding site for residue CLA c 511 source : AQ5 110) chain c residue 26 type sequence R description binding site for residue CLA c 511 source : AQ5 111) chain c residue 35 type sequence W description binding site for residue CLA c 511 source : AQ5 112) chain c residue 38 type sequence G description binding site for residue CLA c 511 source : AQ5 113) chain c residue 39 type sequence N description binding site for residue CLA c 511 source : AQ5 114) chain c residue 41 type sequence R description binding site for residue CLA c 511 source : AQ5 115) chain c residue 42 type sequence L description binding site for residue CLA c 511 source : AQ5 116) chain c residue 45 type sequence L description binding site for residue CLA c 511 source : AQ5 117) chain c residue 48 type sequence K description binding site for residue CLA c 511 source : AQ5 118) chain c residue 52 type sequence A description binding site for residue CLA c 511 source : AQ5 119) chain c residue 126 type sequence G description binding site for residue CLA c 511 source : AQ5 120) chain c residue 127 type sequence F description binding site for residue CLA c 511 source : AQ5 121) chain c residue 130 type sequence V description binding site for residue CLA c 511 source : AQ5 122) chain c residue 53 type sequence H description binding site for residue CLA c 512 source : AQ6 123) chain c residue 54 type sequence V description binding site for residue CLA c 512 source : AQ6 124) chain c residue 57 type sequence A description binding site for residue CLA c 512 source : AQ6 125) chain c residue 125 type sequence L description binding site for residue CLA c 512 source : AQ6 126) chain c residue 147 type sequence F description binding site for residue CLA c 512 source : AQ6 127) chain c residue 163 type sequence F description binding site for residue CLA c 512 source : AQ6 128) chain c residue 164 type sequence H description binding site for residue CLA c 512 source : AQ6 129) chain c residue 170 type sequence I description binding site for residue CLA c 512 source : AQ6 130) chain c residue 50 type sequence L description binding site for residue CLA c 513 source : AQ7 131) chain c residue 124 type sequence V description binding site for residue CLA c 513 source : AQ7 132) chain c residue 128 type sequence G description binding site for residue CLA c 513 source : AQ7 133) chain c residue 131 type sequence Y description binding site for residue CLA c 513 source : AQ7 134) chain c residue 132 type sequence H description binding site for residue CLA c 513 source : AQ7 135) chain c residue 143 type sequence Y description binding site for residue CLA c 513 source : AQ7 136) chain c residue 112 type sequence F description binding site for residue BCR c 514 source : AQ8 137) chain c residue 121 type sequence S description binding site for residue BCR c 514 source : AQ8 138) chain c residue 124 type sequence V description binding site for residue BCR c 514 source : AQ8 139) chain c residue 209 type sequence I description binding site for residue BCR c 515 source : AQ9 140) chain c residue 213 type sequence L description binding site for residue BCR c 515 source : AQ9 141) chain c residue 236 type sequence G description binding site for residue BCR c 515 source : AQ9 142) chain c residue 237 type sequence H description binding site for residue BCR c 515 source : AQ9 143) chain c residue 264 type sequence F description binding site for residue BCR c 515 source : AQ9 144) chain c residue 217 type sequence P description binding site for residue DGD c 516 source : AR1 145) chain c residue 219 type sequence G description binding site for residue DGD c 516 source : AR1 146) chain c residue 220 type sequence G description binding site for residue DGD c 516 source : AR1 147) chain c residue 222 type sequence G description binding site for residue DGD c 516 source : AR1 148) chain c residue 223 type sequence W description binding site for residue DGD c 516 source : AR1 149) chain c residue 225 type sequence V description binding site for residue DGD c 516 source : AR1 150) chain c residue 227 type sequence V description binding site for residue DGD c 516 source : AR1 151) chain c residue 288 type sequence C description binding site for residue DGD c 516 source : AR1 152) chain c residue 292 type sequence F description binding site for residue DGD c 516 source : AR1 153) chain c residue 293 type sequence N description binding site for residue DGD c 516 source : AR1 154) chain c residue 294 type sequence N description binding site for residue DGD c 516 source : AR1 155) chain c residue 295 type sequence T description binding site for residue DGD c 516 source : AR1 156) chain c residue 360 type sequence D description binding site for residue DGD c 516 source : AR1 157) chain c residue 361 type sequence F description binding site for residue DGD c 516 source : AR1 158) chain c residue 362 type sequence R description binding site for residue DGD c 516 source : AR1 159) chain c residue 83 type sequence E description binding site for residue DGD c 517 source : AR2 160) chain c residue 84 type sequence Q description binding site for residue DGD c 517 source : AR2 161) chain c residue 85 type sequence G description binding site for residue DGD c 517 source : AR2 162) chain c residue 406 type sequence S description binding site for residue DGD c 517 source : AR2 163) chain c residue 418 type sequence N description binding site for residue DGD c 517 source : AR2 164) chain c residue 419 type sequence F description binding site for residue DGD c 517 source : AR2 165) chain c residue 420 type sequence V description binding site for residue DGD c 517 source : AR2 166) chain c residue 425 type sequence W description binding site for residue DGD c 517 source : AR2 167) chain c residue 428 type sequence T description binding site for residue DGD c 517 source : AR2 168) chain c residue 405 type sequence N description binding site for residue DGD c 518 source : AR3 169) chain c residue 406 type sequence S description binding site for residue DGD c 518 source : AR3 170) chain c residue 407 type sequence V description binding site for residue DGD c 518 source : AR3 171) chain c residue 415 type sequence N description binding site for residue DGD c 518 source : AR3 172) chain c residue 416 type sequence S description binding site for residue DGD c 518 source : AR3 173) chain c residue 418 type sequence N description binding site for residue DGD c 518 source : AR3 174) chain c residue 74 type sequence H description binding site for residue LMG c 519 source : AR4 175) chain c residue 205 type sequence D description binding site for residue LMG c 520 source : AR5 176) chain c residue 206 type sequence P description binding site for residue LMG c 520 source : AR5 177) chain c residue 239 type sequence W description binding site for residue LMG c 520 source : AR5 178) chain c residue 62 type sequence F description binding site for residue BCR k 101 source : AT1 179) chain c residue 59 type sequence L description binding site for residue BCR k 102 source : AT2 180) chain c residue 122 type sequence S description binding site for residue BCR k 102 source : AT2 181) chain c residue 266-280 type TOPO_DOM sequence WSGEAYLSYSLGALS description Lumenal => ECO:0000269|PubMed:19219048 source Swiss-Prot : SWS_FT_FI1 182) chain c residue 462-473 type TOPO_DOM sequence ESEPVLSMPSLD description Lumenal => ECO:0000269|PubMed:19219048 source Swiss-Prot : SWS_FT_FI1 183) chain c residue 281-301 type TRANSMEM sequence MMGFIATCFVWFNNTVYPSEF description Helical => ECO:0000255|HAMAP-Rule:MF_00717 source Swiss-Prot : SWS_FT_FI2 184) chain c residue 437-461 type TRANSMEM sequence FLVGHLWHAGRARAAAAGFEKGIDR description Helical => ECO:0000255|HAMAP-Rule:MF_00717 source Swiss-Prot : SWS_FT_FI2

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