eF-site ID 5kaf-l
PDB Code 5kaf
Chain l

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Title RT XFEL structure of Photosystem II in the dark state at 3.0 A resolution
Classification ELECTRON TRANSPORT
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence l:  MEPNPNRQPVELNRTSLYLGLLLILVLALLFSSYFFN
Description


Functional site

1) chain l
residue 14
type
sequence R
description binding site for residue SQD B 626
source : AG6

2) chain l
residue 18
type
sequence Y
description binding site for residue SQD B 626
source : AG6

3) chain l
residue 7
type
sequence R
description binding site for residue SQD b 601
source : AM7

4) chain l
residue 8
type
sequence Q
description binding site for residue CLA b 617
source : AO3

5) chain l
residue 10
type
sequence V
description binding site for residue CLA b 617
source : AO3

6) chain l
residue 13
type
sequence N
description binding site for residue LHG d 407
source : AS3

7) chain l
residue 15
type
sequence T
description binding site for residue LHG d 407
source : AS3

8) chain l
residue 19
type
sequence L
description binding site for residue LHG d 407
source : AS3

9) chain l
residue 23
type
sequence L
description binding site for residue PL9 d 408
source : AS4

10) chain l
residue 26
type
sequence V
description binding site for residue PL9 d 408
source : AS4

11) chain l
residue 27
type
sequence L
description binding site for residue PL9 d 408
source : AS4

12) chain l
residue 29
type
sequence L
description binding site for residue PL9 d 408
source : AS4

13) chain l
residue 11
type
sequence E
description binding site for residue LHG l 101
source : AT2

14) chain l
residue 12
type
sequence L
description binding site for residue LHG l 101
source : AT2

15) chain l
residue 13
type
sequence N
description binding site for residue LHG l 101
source : AT2

16) chain l
residue 16
type
sequence S
description binding site for residue LHG l 101
source : AT2

17) chain l
residue 20
type
sequence G
description binding site for residue LHG l 101
source : AT2

18) chain l
residue 36-37
type TOPO_DOM
sequence FN
description Lumenal => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI3


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