eF-site ID 5kaf-b PDB Code 5kaf Chain b click to enlarge Title RT XFEL structure of Photosystem II in the dark state at 3.0 A resolution Classification ELECTRON TRANSPORT Compound Photosystem II protein D1 1 Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1); Sequence b:  GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYE LATFDPSDPVLNPMWRQGMFVLPFMARLGVTGSWSGWSIT GETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDLE LFRDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGL FGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAH HIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSS IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSSYFQ QEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAK GGLFRTGPMNKGDGIAQAWKGHAVFRNKEGEELFVRRMPA FFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSF YGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDG IFRTSPRGWFTFAHAVFALLFFFGHIWHGARTLFRDVFSG IDPELSPEQVEWGFYQKVGDVTTR Description Functional site 1) chain b residue 113 type sequence W description binding site for residue LMG A 613 source : AD4 2) chain b residue 117 type sequence Y description binding site for residue LMG A 613 source : AD4 3) chain b residue 75 type sequence W description binding site for residue SQD A 619 source : AD9 4) chain b residue 89 type sequence G description binding site for residue SQD A 619 source : AD9 5) chain b residue 94 type sequence E description binding site for residue SQD A 619 source : AD9 6) chain b residue 98 type sequence L description binding site for residue SQD A 619 source : AD9 7) chain b residue 33 type sequence W description binding site for residue BCR T 101 source : AK7 8) chain b residue 36 type sequence S description binding site for residue BCR T 101 source : AK7 9) chain b residue 6 type sequence Y description binding site for residue LHG a 613 source : AM4 10) chain b residue 7 type sequence R description binding site for residue LHG a 613 source : AM4 11) chain b residue 468 type sequence W description binding site for residue LHG a 613 source : AM4 12) chain b residue 18 type sequence R description binding site for residue SQD b 601 source : AM7 13) chain b residue 190 type sequence F description binding site for residue CLA b 604 source : AM8 14) chain b residue 189 type sequence G description binding site for residue CLA b 605 source : AM9 15) chain b residue 190 type sequence F description binding site for residue CLA b 605 source : AM9 16) chain b residue 192 type sequence P description binding site for residue CLA b 605 source : AM9 17) chain b residue 197 type sequence G description binding site for residue CLA b 605 source : AM9 18) chain b residue 201 type sequence H description binding site for residue CLA b 605 source : AM9 19) chain b residue 204 type sequence A description binding site for residue CLA b 605 source : AM9 20) chain b residue 247 type sequence F description binding site for residue CLA b 605 source : AM9 21) chain b residue 250 type sequence F description binding site for residue CLA b 605 source : AM9 22) chain b residue 251 type sequence V description binding site for residue CLA b 605 source : AM9 23) chain b residue 68 type sequence R description binding site for residue CLA b 606 source : AN1 24) chain b residue 69 type sequence L description binding site for residue CLA b 606 source : AN1 25) chain b residue 146 type sequence A description binding site for residue CLA b 606 source : AN1 26) chain b residue 150 type sequence C description binding site for residue CLA b 606 source : AN1 27) chain b residue 153 type sequence F description binding site for residue CLA b 606 source : AN1 28) chain b residue 201 type sequence H description binding site for residue CLA b 606 source : AN1 29) chain b residue 202 type sequence H description binding site for residue CLA b 606 source : AN1 30) chain b residue 248 type sequence A description binding site for residue CLA b 606 source : AN1 31) chain b residue 252 type sequence V description binding site for residue CLA b 606 source : AN1 32) chain b residue 262 type sequence T description binding site for residue CLA b 606 source : AN1 33) chain b residue 33 type sequence W description binding site for residue CLA b 607 source : AN2 34) chain b residue 61 type sequence F description binding site for residue CLA b 607 source : AN2 35) chain b residue 65 type sequence F description binding site for residue CLA b 607 source : AN2 36) chain b residue 68 type sequence R description binding site for residue CLA b 607 source : AN2 37) chain b residue 145 type sequence L description binding site for residue CLA b 607 source : AN2 38) chain b residue 149 type sequence L description binding site for residue CLA b 607 source : AN2 39) chain b residue 245 type sequence V description binding site for residue CLA b 607 source : AN2 40) chain b residue 248 type sequence A description binding site for residue CLA b 607 source : AN2 41) chain b residue 249 type sequence A description binding site for residue CLA b 607 source : AN2 42) chain b residue 252 type sequence V description binding site for residue CLA b 607 source : AN2 43) chain b residue 451 type sequence F description binding site for residue CLA b 607 source : AN2 44) chain b residue 455 type sequence H description binding site for residue CLA b 607 source : AN2 45) chain b residue 458 type sequence F description binding site for residue CLA b 607 source : AN2 46) chain b residue 27 type sequence T description binding site for residue CLA b 608 source : AN3 47) chain b residue 30 type sequence V description binding site for residue CLA b 608 source : AN3 48) chain b residue 31 type sequence A description binding site for residue CLA b 608 source : AN3 49) chain b residue 33 type sequence W description binding site for residue CLA b 608 source : AN3 50) chain b residue 34 type sequence A description binding site for residue CLA b 608 source : AN3 51) chain b residue 62 type sequence V description binding site for residue CLA b 608 source : AN3 52) chain b residue 65 type sequence F description binding site for residue CLA b 608 source : AN3 53) chain b residue 66 type sequence M description binding site for residue CLA b 608 source : AN3 54) chain b residue 68 type sequence R description binding site for residue CLA b 608 source : AN3 55) chain b residue 96 type sequence V description binding site for residue CLA b 608 source : AN3 56) chain b residue 100 type sequence H description binding site for residue CLA b 608 source : AN3 57) chain b residue 103 type sequence L description binding site for residue CLA b 608 source : AN3 58) chain b residue 143 type sequence L description binding site for residue CLA b 608 source : AN3 59) chain b residue 205 type sequence A description binding site for residue CLA b 608 source : AN3 60) chain b residue 69 type sequence L description binding site for residue CLA b 609 source : AN4 61) chain b residue 71 type sequence V description binding site for residue CLA b 609 source : AN4 62) chain b residue 90 type sequence F description binding site for residue CLA b 609 source : AN4 63) chain b residue 91 type sequence W description binding site for residue CLA b 609 source : AN4 64) chain b residue 96 type sequence V description binding site for residue CLA b 609 source : AN4 65) chain b residue 100 type sequence H description binding site for residue CLA b 609 source : AN4 66) chain b residue 149 type sequence L description binding site for residue CLA b 609 source : AN4 67) chain b residue 152 type sequence G description binding site for residue CLA b 609 source : AN4 68) chain b residue 153 type sequence F description binding site for residue CLA b 609 source : AN4 69) chain b residue 156 type sequence F description binding site for residue CLA b 609 source : AN4 70) chain b residue 157 type sequence H description binding site for residue CLA b 609 source : AN4 71) chain b residue 162 type sequence F description binding site for residue CLA b 609 source : AN4 72) chain b residue 164 type sequence P description binding site for residue CLA b 609 source : AN4 73) chain b residue 33 type sequence W description binding site for residue CLA b 610 source : AN5 74) chain b residue 40 type sequence Y description binding site for residue CLA b 610 source : AN5 75) chain b residue 59 type sequence G description binding site for residue CLA b 610 source : AN5 76) chain b residue 61 type sequence F description binding site for residue CLA b 610 source : AN5 77) chain b residue 327 type sequence T description binding site for residue CLA b 610 source : AN5 78) chain b residue 328 type sequence G description binding site for residue CLA b 610 source : AN5 79) chain b residue 450 type sequence W description binding site for residue CLA b 610 source : AN5 80) chain b residue 236 type sequence T description binding site for residue CLA b 611 source : AN6 81) chain b residue 239 type sequence S description binding site for residue CLA b 611 source : AN6 82) chain b residue 243 type sequence A description binding site for residue CLA b 611 source : AN6 83) chain b residue 247 type sequence F description binding site for residue CLA b 611 source : AN6 84) chain b residue 463 type sequence F description binding site for residue CLA b 611 source : AN6 85) chain b residue 466 type sequence H description binding site for residue CLA b 611 source : AN6 86) chain b residue 467 type sequence I description binding site for residue CLA b 611 source : AN6 87) chain b residue 139 type sequence F description binding site for residue CLA b 612 source : AN7 88) chain b residue 208 type sequence V description binding site for residue CLA b 612 source : AN7 89) chain b residue 212 type sequence A description binding site for residue CLA b 612 source : AN7 90) chain b residue 215 type sequence F description binding site for residue CLA b 612 source : AN7 91) chain b residue 216 type sequence H description binding site for residue CLA b 612 source : AN7 92) chain b residue 221 type sequence P description binding site for residue CLA b 612 source : AN7 93) chain b residue 222 type sequence P description binding site for residue CLA b 612 source : AN7 94) chain b residue 135 type sequence L description binding site for residue CLA b 613 source : AN8 95) chain b residue 138 type sequence M description binding site for residue CLA b 613 source : AN8 96) chain b residue 139 type sequence F description binding site for residue CLA b 613 source : AN8 97) chain b residue 142 type sequence H description binding site for residue CLA b 613 source : AN8 98) chain b residue 236 type sequence T description binding site for residue CLA b 613 source : AN8 99) chain b residue 237 type sequence V description binding site for residue CLA b 613 source : AN8 100) chain b residue 240 type sequence S description binding site for residue CLA b 613 source : AN8 101) chain b residue 241 type sequence S description binding site for residue CLA b 613 source : AN8 102) chain b residue 5 type sequence W description binding site for residue CLA b 614 source : AN9 103) chain b residue 6 type sequence Y description binding site for residue CLA b 614 source : AN9 104) chain b residue 7 type sequence R description binding site for residue CLA b 614 source : AN9 105) chain b residue 8 type sequence V description binding site for residue CLA b 614 source : AN9 106) chain b residue 9 type sequence H description binding site for residue CLA b 614 source : AN9 107) chain b residue 242 type sequence I description binding site for residue CLA b 614 source : AN9 108) chain b residue 458 type sequence F description binding site for residue CLA b 614 source : AN9 109) chain b residue 461 type sequence L description binding site for residue CLA b 614 source : AN9 110) chain b residue 462 type sequence F description binding site for residue CLA b 614 source : AN9 111) chain b residue 465 type sequence G description binding site for residue CLA b 614 source : AN9 112) chain b residue 468 type sequence W description binding site for residue CLA b 614 source : AN9 113) chain b residue 469 type sequence H description binding site for residue CLA b 614 source : AN9 114) chain b residue 472 type sequence R description binding site for residue CLA b 614 source : AN9 115) chain b residue 479 type sequence F description binding site for residue CLA b 614 source : AN9 116) chain b residue 9 type sequence H description binding site for residue CLA b 615 source : AO1 117) chain b residue 12 type sequence L description binding site for residue CLA b 615 source : AO1 118) chain b residue 19 type sequence L description binding site for residue CLA b 615 source : AO1 119) chain b residue 22 type sequence A description binding site for residue CLA b 615 source : AO1 120) chain b residue 23 type sequence H description binding site for residue CLA b 615 source : AO1 121) chain b residue 26 type sequence H description binding site for residue CLA b 615 source : AO1 122) chain b residue 27 type sequence T description binding site for residue CLA b 615 source : AO1 123) chain b residue 237 type sequence V description binding site for residue CLA b 615 source : AO1 124) chain b residue 238 type sequence L description binding site for residue CLA b 615 source : AO1 125) chain b residue 241 type sequence S description binding site for residue CLA b 615 source : AO1 126) chain b residue 245 type sequence V description binding site for residue CLA b 615 source : AO1 127) chain b residue 9 type sequence H description binding site for residue CLA b 616 source : AO2 128) chain b residue 26 type sequence H description binding site for residue CLA b 616 source : AO2 129) chain b residue 30 type sequence V description binding site for residue CLA b 616 source : AO2 130) chain b residue 8 type sequence V description binding site for residue CLA b 617 source : AO3 131) chain b residue 9 type sequence H description binding site for residue CLA b 617 source : AO3 132) chain b residue 11 type sequence V description binding site for residue CLA b 617 source : AO3 133) chain b residue 115 type sequence W description binding site for residue CLA b 617 source : AO3 134) chain b residue 23 type sequence H description binding site for residue CLA b 618 source : AO4 135) chain b residue 138 type sequence M description binding site for residue CLA b 618 source : AO4 136) chain b residue 142 type sequence H description binding site for residue CLA b 618 source : AO4 137) chain b residue 145 type sequence L description binding site for residue CLA b 618 source : AO4 138) chain b residue 20 type sequence I description binding site for residue CLA b 619 source : AO5 139) chain b residue 24 type sequence L description binding site for residue CLA b 619 source : AO5 140) chain b residue 113 type sequence W description binding site for residue CLA b 619 source : AO5 141) chain b residue 114 type sequence H description binding site for residue CLA b 619 source : AO5 142) chain b residue 120 type sequence L description binding site for residue CLA b 619 source : AO5 143) chain b residue 25 type sequence M description binding site for residue BCR b 620 source : AO6 144) chain b residue 29 type sequence L description binding site for residue BCR b 620 source : AO6 145) chain b residue 115 type sequence W description binding site for residue BCR b 620 source : AO6 146) chain b residue 29 type sequence L description binding site for residue BCR b 621 source : AO7 147) chain b residue 32 type sequence G description binding site for residue BCR b 621 source : AO7 148) chain b residue 36 type sequence S description binding site for residue BCR b 621 source : AO7 149) chain b residue 102 type sequence V description binding site for residue BCR b 621 source : AO7 150) chain b residue 105 type sequence G description binding site for residue BCR b 621 source : AO7 151) chain b residue 109 type sequence L description binding site for residue BCR b 622 source : AO8 152) chain b residue 112 type sequence C description binding site for residue BCR b 622 source : AO8 153) chain b residue 113 type sequence W description binding site for residue BCR b 622 source : AO8 154) chain b residue 327 type sequence T description binding site for residue LMG b 623 source : AO9 155) chain b residue 328 type sequence G description binding site for residue LMG b 623 source : AO9 156) chain b residue 453 type sequence F description binding site for residue LMG b 623 source : AO9 157) chain b residue 184 type sequence E description binding site for residue LMG b 624 source : AP1 158) chain b residue 185 type sequence W description binding site for residue LMG b 624 source : AP1 159) chain b residue 228 type sequence A description binding site for residue LMG b 625 source : AP2 160) chain b residue 151 type sequence F description binding site for residue LMG c 522 source : AR6 161) chain b residue 155 type sequence A description binding site for residue LMG c 522 source : AR6 162) chain b residue 159 type sequence T description binding site for residue LMG c 522 source : AR6 163) chain b residue 183 type sequence P description binding site for residue LMG c 522 source : AR6 164) chain b residue 185 type sequence W description binding site for residue LMG c 522 source : AR6 165) chain b residue 207 type sequence I description binding site for residue LMG c 522 source : AR6 166) chain b residue 250 type sequence F description binding site for residue DGD h 102 source : AS9 167) chain b residue 258 type sequence Y description binding site for residue DGD h 102 source : AS9 168) chain b residue 273 type sequence Y description binding site for residue DGD h 102 source : AS9 169) chain b residue 279 type sequence Y description binding site for residue DGD h 102 source : AS9 170) chain b residue 4 type sequence P description binding site for residue LHG l 101 source : AT2 171) chain b residue 5 type sequence W description binding site for residue LHG l 101 source : AT2 172) chain b residue 6 type sequence Y description binding site for residue LHG l 101 source : AT2

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