eF-site ID 5jvh-J
PDB Code 5jvh
Chain J

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Title The crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with evernimicin
Classification RIBOSOME
Compound 23S ribosomal RNA
Source ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1;
Sequence J:  KRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKS
NQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMG
KGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHK
LPIQTKMVKREVYDEA
Description


Functional site

1) chain J
residue 52
type
sequence R
description binding site for residue 6O1 X 2901
source : AC1

2) chain J
residue 53
type
sequence I
description binding site for residue 6O1 X 2901
source : AC1

3) chain J
residue 56
type
sequence S
description binding site for residue 6O1 X 2901
source : AC1

4) chain J
residue 57
type
sequence R
description binding site for residue 6O1 X 2901
source : AC1

5) chain J
residue 60
type
sequence R
description binding site for residue 6O1 X 2901
source : AC1

6) chain J
residue 60-71
type prosite
sequence RRGGKIYIRIFP
description RIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. RRgGKIYIRIFP
source prosite : PS00586

7) chain J
residue 83-94
type prosite
sequence RMGKGKGAVEYW
description RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGaveyW
source prosite : PS00701


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