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eF-site ID
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5jvh-B |
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PDB Code
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5jvh |
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Chain
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B |
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click to enlarge
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Title
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The crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with evernimicin |
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Classification
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RIBOSOME |
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Compound
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23S ribosomal RNA |
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Source
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ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1; |
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Sequence
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B: |
MKGILGTKIGMTQIWKNDRAIPVTVVLAGPCPIVQRKTAQ
TDGYEAVQIGYAPKAERKVNKPMQGHFAKAGVAPTRILRE
FRGFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQGVMKRW
NFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHM
GMERVTVQNLEVVEIRAGENLILVKGAIPGANGGLVVLRS
AAKAS
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Description
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Functional site
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1)
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chain |
B |
| residue |
135 |
| type |
|
| sequence |
H
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| description |
binding site for residue MG X 3018
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| source |
: AN6
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2)
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chain |
B |
| residue |
111 |
| type |
|
| sequence |
K
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| description |
binding site for residue MG K 202
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| source |
: AO2
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3)
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chain |
B |
| residue |
96-119 |
| type |
prosite |
| sequence |
FAEGEKIDATGTSKGKGTQGVMKR
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| description |
RIBOSOMAL_L3 Ribosomal protein L3 signature. FaegekiDatGtSkGKGtqGvmkR
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| source |
prosite : PS00474
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