eF-site ID 5jvh-A
PDB Code 5jvh
Chain A

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Title The crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with evernimicin
Classification RIBOSOME
Compound 23S ribosomal RNA
Source ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1;
Sequence A:  RQMTTADFSGLTKKRPEKALTEALPKTGGRNNRGRITSRF
IGGGHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARIA
LLHYADGEKRYILAPEGLTVGATVNAGPEAEPKLGNALPL
RFVPVGAVVHALELVPGKGAQLARSAGTSVQVQGKESDYV
IVRLPSGELRRVHSECYATIGAVGNAEHKNIVLGKAGRSR
WLGRKPHQRGSAMNPVDHPHGGGEGRTGAGRVPVTPWGKP
TKGLKTRRKRKTSDRFIVT
Description


Functional site

1) chain A
residue 225
type
sequence A
description binding site for residue MG X 2969
source : AI7

2) chain A
residue 227
type
sequence N
description binding site for residue MG X 2969
source : AI7

3) chain A
residue 233
type
sequence H
description binding site for residue MG X 3017
source : AN5

4) chain A
residue 234
type
sequence G
description binding site for residue MG X 3017
source : AN5

5) chain A
residue 219-230
type prosite
sequence PHQRGSAMNPVD
description RIBOSOMAL_L2 Ribosomal protein L2 signature. PhqRGSAmNPvD
source prosite : PS00467


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