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eF-site ID
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5jvg-T |
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PDB Code
|
5jvg |
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Chain
|
T |
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click to enlarge
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Title
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The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin |
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Classification
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RIBOSOME |
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Compound
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23S ribosomal RNA |
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Source
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ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1; |
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Sequence
|
T: |
NGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGV
GMGRDHTLFALSDGKVVFINKGKGARFISIEAAQ
|
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Description
|
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Functional site
|
|
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1)
|
chain |
T |
| residue |
72 |
| type |
|
| sequence |
K
|
| description |
binding site for residue MG Y 219
|
| source |
: BU2
|
|
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2)
|
chain |
T |
| residue |
17 |
| type |
|
| sequence |
N
|
| description |
binding site for residue MG T 101
|
| source |
: BU7
|
|
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3)
|
chain |
T |
| residue |
34-48 |
| type |
prosite |
| sequence |
GNILVRQRGTKFKAG
|
| description |
RIBOSOMAL_L27 Ribosomal protein L27 signature. GnILvRQRGtkfkaG
|
| source |
prosite : PS00831
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