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eF-site ID
|
5jvg-I |
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PDB Code
|
5jvg |
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Chain
|
I |
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click to enlarge
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Title
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The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin |
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Classification
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RIBOSOME |
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Compound
|
23S ribosomal RNA |
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Source
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ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1; |
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Sequence
|
I: |
GSRKDRKRVGRGPGGTDKTAGRGHKGQKSRSGAGKGAFFE
GGRSRLIARLPKRGFNNVGTTYEVVKLSQLQDLEDTTFDR
DTLEAYRLVRRKNRPVKLLASGEISRAVTVHVDAASAAAI
KAVEAAGGRVVLPE
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Description
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Functional site
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|
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1)
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chain |
I |
| residue |
49 |
| type |
|
| sequence |
F
|
| description |
binding site for residue MG X 2947
|
| source |
: AG7
|
|
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2)
|
chain |
I |
| residue |
43 |
| type |
|
| sequence |
A
|
| description |
binding site for residue MG X 3051
|
| source |
: AQ5
|
|
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3)
|
chain |
I |
| residue |
107-137 |
| type |
prosite |
| sequence |
KLLASGEISRAVTVHVDAASAAAIKAVEAAG
|
| description |
RIBOSOMAL_L15 Ribosomal protein L15 signature. KLLAsGeIsra..VtVhvdaASaaAikaVeaaG
|
| source |
prosite : PS00475
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