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eF-site ID
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5jvg-G |
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PDB Code
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5jvg |
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Chain
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G |
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click to enlarge
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Title
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The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin |
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Classification
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RIBOSOME |
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Compound
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23S ribosomal RNA |
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Source
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ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1; |
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Sequence
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G: |
KTYIPKNDEQNWVVVDASGVPLGRLATLIASRIRGKHRPD
FTPNMIQGDFVVVINAAQVALTGKKLDDKVYTRYTGYQGG
LKTETAREALSKHPERVIEHAVFGMLPKGRQGRAMHTRLK
VYAGETHPHSAQKPQVLKTQPL
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Description
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Functional site
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|
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1)
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chain |
G |
| residue |
110 |
| type |
|
| sequence |
L
|
| description |
binding site for residue SPD X 3321
|
| source |
: BR3
|
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2)
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chain |
G |
| residue |
106 |
| type |
|
| sequence |
Y
|
| description |
binding site for residue MG X 3325
|
| source |
: BR7
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3)
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chain |
G |
| residue |
131-153 |
| type |
prosite |
| sequence |
VFGMLPKGRQGRAMHTRLKVYAG
|
| description |
RIBOSOMAL_L13 Ribosomal protein L13 signature. VFGMLPkgrq.GRamhtrLkVYaG
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| source |
prosite : PS00783
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