eF-site ID 5jvg-A PDB Code 5jvg Chain A click to enlarge Title The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin Classification RIBOSOME Compound 23S ribosomal RNA Source ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1; Sequence A:  MAVKKYRPYTPSRRQMTTADFSGLTKKRPEKALTEALPKT GGRNNRGRITSRFIGGGHKRLYRIIDFKRRDKSGVNAKVA AIEYDPNRSARIALLHYADGEKRYILAPEGLTVGATVNAG PEAEPKLGNALPLRFVPVGAVVHALELVPGKGAQLARSAG TSVQVQGKESDYVIVRLPSGELRRVHSECYATIGAVGNAE HKNIVLGKAGRSRWLGRKPHQRGSAMNPVDHPHGGGEGRT GAGRVPVTPWGKPTKGLKTRRKRKTSDRFIVT Description Functional site 1) chain A residue 225 type sequence A description binding site for residue MG X 2931 source : AF1 2) chain A residue 237 type sequence E description binding site for residue MG X 3018 source : AN3 3) chain A residue 239 type sequence R description binding site for residue MG X 3018 source : AN3 4) chain A residue 233 type sequence H description binding site for residue MG X 3323 source : BR5 5) chain A residue 234 type sequence G description binding site for residue MG X 3323 source : BR5 6) chain A residue 235 type sequence G description binding site for residue MG X 3323 source : BR5 7) chain A residue 242 type sequence A description binding site for residue MG X 3323 source : BR5 8) chain A residue 239 type sequence R description binding site for residue MG X 3324 source : BR6 9) chain A residue 249 type sequence P description binding site for residue MG A 301 source : BU3 10) chain A residue 219-230 type prosite sequence PHQRGSAMNPVD description RIBOSOMAL_L2 Ribosomal protein L2 signature. PhqRGSAmNPvD source prosite : PS00467

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