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|
eF-site ID
|
5jvg-2 |
|
PDB Code
|
5jvg |
|
Chain
|
2 |
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click to enlarge
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Title
|
The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin |
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Classification
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RIBOSOME |
|
Compound
|
23S ribosomal RNA |
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Source
|
ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1; |
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|
Sequence
|
2: |
MKRTYQPNNRKRAKTHGFRARMKTKSGRNILARRRAKGRH
QLTVSD
|
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Description
|
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Functional site
|
|
|
1)
|
chain |
2 |
| residue |
40 |
| type |
|
| sequence |
H
|
| description |
binding site for residue MG X 3148
|
| source |
: AZ5
|
|
|
2)
|
chain |
2 |
| residue |
41 |
| type |
|
| sequence |
Q
|
| description |
binding site for residue MG X 3263
|
| source |
: BL9
|
|
|
3)
|
chain |
2 |
| residue |
2-21 |
| type |
prosite |
| sequence |
KRTYQPNNRKRAKTHGFRAR
|
| description |
RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTYQpnnrkRakth.GFraR
|
| source |
prosite : PS00784
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