eF-site ID 5jf8-A PDB Code 5jf8 Chain A click to enlarge Title Crystal structure of type 2 PDF from Streptococcus agalactiae in complex with inhibitor RAS358 (21) Classification HYDROLASE Compound Peptide deformylase Source Streptococcus agalactiae serotype III (strain NEM316) (DEF_STRA3) Sequence A:  AAIDKLVKASHLIDMNDIIREGNPTLRKVAEEVTFPLSEK EEILGEKMMQFLKHSQDPIMAEKLGLRGGVGLAAPQLDIS KRIIAVLVPNVEDAQGNPPKEAYSLQEVMYNPKVVSHSVQ DAALSDGEGXLSVDREVPGYVVRHARVTIEYFDKTGEKHR LKLKGYNSIVVQHEIDHIDGIMFYDRINEKNPFAVKEGLL ILE Description Functional site 1) chain A residue 72 type sequence G description binding site for residue PN3 A 301 source : AC1 2) chain A residue 77 type sequence Q description binding site for residue PN3 A 301 source : AC1 3) chain A residue 129 type sequence E description binding site for residue PN3 A 301 source : AC1 4) chain A residue 130 type sequence G description binding site for residue PN3 A 301 source : AC1 5) chain A residue 131 type sequence X description binding site for residue PN3 A 301 source : AC1 6) chain A residue 132 type sequence L description binding site for residue PN3 A 301 source : AC1 7) chain A residue 167 type sequence Y description binding site for residue PN3 A 301 source : AC1 8) chain A residue 174 type sequence H description binding site for residue PN3 A 301 source : AC1 9) chain A residue 175 type sequence E description binding site for residue PN3 A 301 source : AC1 10) chain A residue 178 type sequence H description binding site for residue PN3 A 301 source : AC1 11) chain A residue 145 type sequence H description binding site for residue ACT A 302 source : AC2 12) chain A residue 158 type sequence E description binding site for residue ACT A 302 source : AC2 13) chain A residue 177 type sequence D description binding site for residue ACT A 302 source : AC2 14) chain A residue 187 type sequence R description binding site for residue ACT A 302 source : AC2 15) chain A residue 32 type sequence E description binding site for residue IMD A 303 source : AC3 16) chain A residue 147 type sequence R description binding site for residue IMD A 303 source : AC3 17) chain A residue 148 type sequence V description binding site for residue IMD A 303 source : AC3 18) chain A residue 163 type sequence K description binding site for residue IMD A 303 source : AC3 19) chain A residue 164 type sequence L description binding site for residue IMD A 303 source : AC3 20) chain A residue 77 type sequence Q description binding site for residue ZN A 304 source : AC4 21) chain A residue 131 type sequence X description binding site for residue ZN A 304 source : AC4 22) chain A residue 174 type sequence H description binding site for residue ZN A 304 source : AC4 23) chain A residue 178 type sequence H description binding site for residue ZN A 304 source : AC4 24) chain A residue 55 type sequence H description binding site for residue ZN A 305 source : AC5 25) chain A residue 198 type sequence E description binding site for residue ZN A 305 source : AC5 26) chain A residue 118 type sequence H description binding site for residue ZN A 306 source : AC6 27) chain A residue 94 type sequence D description binding site for residue ZN A 307 source : AC7 28) chain A residue 190 type sequence E description binding site for residue ZN A 307 source : AC7 29) chain A residue 145 type sequence H description binding site for residue ZN A 308 source : AC8 30) chain A residue 158 type sequence E description binding site for residue ZN A 308 source : AC8 31) chain A residue 12 type sequence H description binding site for residue ZN A 309 source : AC9 32) chain A residue 18 type sequence D description binding site for residue ZN A 309 source : AC9 33) chain A residue 43 type sequence E description binding site for residue ZN A 310 source : AD1 34) chain A residue 47 type sequence E description binding site for residue ZN A 310 source : AD1 35) chain A residue 102 type sequence E description binding site for residue ZN A 311 source : AD2 36) chain A residue 151 type sequence E description binding site for residue ZN A 311 source : AD2 37) chain A residue 159 type sequence K description binding site for residue ZN A 311 source : AD2 38) chain A residue 32 type sequence E description binding site for residue ZN A 312 source : AD3 39) chain A residue 175 type ACT_SITE sequence E description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00163 source Swiss-Prot : SWS_FT_FI1 40) chain A residue 131 type BINDING sequence X description BINDING => ECO:0000255|HAMAP-Rule:MF_00163 source Swiss-Prot : SWS_FT_FI2 41) chain A residue 174 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00163 source Swiss-Prot : SWS_FT_FI2 42) chain A residue 178 type BINDING sequence H description BINDING => ECO:0000255|HAMAP-Rule:MF_00163 source Swiss-Prot : SWS_FT_FI2

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