eF-site ID 5j61-G
PDB Code 5j61
Chain G

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Title D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with glycyl-3'-aminoadenosine at 2.10 Angstrom resolution
Classification HYDROLASE
Compound D-tyrosyl-tRNA(Tyr) deacylase
Source Plasmodium falciparum (isolate 3D7) (Q8IIS0_PLAF7)
Sequence G:  MRVVIQRVKGAILSVRELEIISEIKNGLICFLGIHKNDTW
EDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQF
TLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYND
DKIKIGKFGNYMNIDVTNDGPVTIYIDTHDIN
Description


Functional site

1) chain G
residue 41
type
sequence L
description binding site for residue A3G G 501
source : AC7

2) chain G
residue 43
type
sequence I
description binding site for residue A3G G 501
source : AC7

3) chain G
residue 87
type
sequence S
description binding site for residue A3G G 501
source : AC7

4) chain G
residue 88
type
sequence Q
description binding site for residue A3G G 501
source : AC7

5) chain G
residue 89
type
sequence F
description binding site for residue A3G G 501
source : AC7

6) chain G
residue 107
type
sequence K
description binding site for residue A3G G 501
source : AC7

7) chain G
residue 137
type
sequence F
description binding site for residue A3G G 501
source : AC7

8) chain G
residue 138
type
sequence G
description binding site for residue A3G G 501
source : AC7

9) chain G
residue 150
type
sequence P
description binding site for residue A3G H 501
source : AC8

10) chain G
residue 72
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI2

11) chain G
residue 89
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:20007323, ECO:0007744|PDB:3KO4, ECO:0007744|PDB:3KO5
source Swiss-Prot : SWS_FT_FI3

12) chain G
residue 90
type ACT_SITE
sequence T
description Nucleophile => ECO:0000305|PubMed:20007323
source Swiss-Prot : SWS_FT_FI1


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